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The clinical value, regulatory mechanisms, and gene network of the cancer-testis gene STK31 in pancreatic cancer
We aimed to identify STK31 as a cancer-testis (CT) gene and to explore its potential clinical value, regulatory mechanisms, and gene network in pancreatic cancer (PC). Gene expression data were generated from normal organ samples and pancreatic cancer samples from three public databases. STK31 expre...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals LLC
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5471042/ https://www.ncbi.nlm.nih.gov/pubmed/28422722 http://dx.doi.org/10.18632/oncotarget.16814 |
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author | Zhang, Kai Lu, Zipeng Zhu, Yi Tian, Lei Zhang, Jingjing Xi, Chunhua Gao, Wentao Jiang, Kuirong Miao, Yi |
author_facet | Zhang, Kai Lu, Zipeng Zhu, Yi Tian, Lei Zhang, Jingjing Xi, Chunhua Gao, Wentao Jiang, Kuirong Miao, Yi |
author_sort | Zhang, Kai |
collection | PubMed |
description | We aimed to identify STK31 as a cancer-testis (CT) gene and to explore its potential clinical value, regulatory mechanisms, and gene network in pancreatic cancer (PC). Gene expression data were generated from normal organ samples and pancreatic cancer samples from three public databases. STK31 expression patterns in normal and PC tissues were identified, and we explored its regulatory mechanisms. Gene ontology (GO) and pathway analyses of STK31-related genes were performed and an STK31 protein–protein interaction (PPI) network was constructed. STK31 was confirmed as a CT gene in PC and its expression was significantly higher in patients with new neoplasm compared with patients without new neoplasm (P = 0.046) and in more advanced pathologic stages than in earlier stages (P = 0.002); methylation level correlated negatively with STK31 expression. In total, 757 STK31-related genes were identified, and were significantly enriched in terms of polymorphisms and alternative splicings. The PPI network predicted that STK31 was physically associated with the PIWI (originally P-element Induced WImpy testis in Drosophila) and Tudor families. |
format | Online Article Text |
id | pubmed-5471042 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Impact Journals LLC |
record_format | MEDLINE/PubMed |
spelling | pubmed-54710422017-06-27 The clinical value, regulatory mechanisms, and gene network of the cancer-testis gene STK31 in pancreatic cancer Zhang, Kai Lu, Zipeng Zhu, Yi Tian, Lei Zhang, Jingjing Xi, Chunhua Gao, Wentao Jiang, Kuirong Miao, Yi Oncotarget Research Paper We aimed to identify STK31 as a cancer-testis (CT) gene and to explore its potential clinical value, regulatory mechanisms, and gene network in pancreatic cancer (PC). Gene expression data were generated from normal organ samples and pancreatic cancer samples from three public databases. STK31 expression patterns in normal and PC tissues were identified, and we explored its regulatory mechanisms. Gene ontology (GO) and pathway analyses of STK31-related genes were performed and an STK31 protein–protein interaction (PPI) network was constructed. STK31 was confirmed as a CT gene in PC and its expression was significantly higher in patients with new neoplasm compared with patients without new neoplasm (P = 0.046) and in more advanced pathologic stages than in earlier stages (P = 0.002); methylation level correlated negatively with STK31 expression. In total, 757 STK31-related genes were identified, and were significantly enriched in terms of polymorphisms and alternative splicings. The PPI network predicted that STK31 was physically associated with the PIWI (originally P-element Induced WImpy testis in Drosophila) and Tudor families. Impact Journals LLC 2017-04-04 /pmc/articles/PMC5471042/ /pubmed/28422722 http://dx.doi.org/10.18632/oncotarget.16814 Text en Copyright: © 2017 Zhang et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) (CC-BY), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Zhang, Kai Lu, Zipeng Zhu, Yi Tian, Lei Zhang, Jingjing Xi, Chunhua Gao, Wentao Jiang, Kuirong Miao, Yi The clinical value, regulatory mechanisms, and gene network of the cancer-testis gene STK31 in pancreatic cancer |
title | The clinical value, regulatory mechanisms, and gene network of the cancer-testis gene STK31 in pancreatic cancer |
title_full | The clinical value, regulatory mechanisms, and gene network of the cancer-testis gene STK31 in pancreatic cancer |
title_fullStr | The clinical value, regulatory mechanisms, and gene network of the cancer-testis gene STK31 in pancreatic cancer |
title_full_unstemmed | The clinical value, regulatory mechanisms, and gene network of the cancer-testis gene STK31 in pancreatic cancer |
title_short | The clinical value, regulatory mechanisms, and gene network of the cancer-testis gene STK31 in pancreatic cancer |
title_sort | clinical value, regulatory mechanisms, and gene network of the cancer-testis gene stk31 in pancreatic cancer |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5471042/ https://www.ncbi.nlm.nih.gov/pubmed/28422722 http://dx.doi.org/10.18632/oncotarget.16814 |
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