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Associations between radiologist-defined semantic and automatically computed radiomic features in non-small cell lung cancer
Tumor phenotypes captured in computed tomography (CT) images can be described qualitatively and quantitatively using radiologist-defined “semantic” and computer-derived “radiomic” features, respectively. While both types of features have shown to be promising predictors of prognosis, the association...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5471260/ https://www.ncbi.nlm.nih.gov/pubmed/28615677 http://dx.doi.org/10.1038/s41598-017-02425-5 |
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author | Yip, Stephen S. F. Liu, Ying Parmar, Chintan Li, Qian Liu, Shichang Qu, Fangyuan Ye, Zhaoxiang Gillies, Robert J. Aerts, Hugo J. W. L. |
author_facet | Yip, Stephen S. F. Liu, Ying Parmar, Chintan Li, Qian Liu, Shichang Qu, Fangyuan Ye, Zhaoxiang Gillies, Robert J. Aerts, Hugo J. W. L. |
author_sort | Yip, Stephen S. F. |
collection | PubMed |
description | Tumor phenotypes captured in computed tomography (CT) images can be described qualitatively and quantitatively using radiologist-defined “semantic” and computer-derived “radiomic” features, respectively. While both types of features have shown to be promising predictors of prognosis, the association between these groups of features remains unclear. We investigated the associations between semantic and radiomic features in CT images of 258 non-small cell lung adenocarcinomas. The tumor imaging phenotypes were described using 9 qualitative semantic features that were scored by radiologists, and 57 quantitative radiomic features that were automatically calculated using mathematical algorithms. Of the 9 semantic features, 3 were rated on a binary scale (cavitation, air bronchogram, and calcification) and 6 were rated on a categorical scale (texture, border definition, contour, lobulation, spiculation, and concavity). 32–41 radiomic features were associated with the binary semantic features (AUC = 0.56–0.76). The relationship between all radiomic features and the categorical semantic features ranged from weak to moderate (|Spearmen’s correlation| = 0.002–0.65). There are associations between semantic and radiomic features, however the associations were not strong despite being significant. Our results indicate that radiomic features may capture distinct tumor phenotypes that fail to be perceived by naked eye that semantic features do not describe and vice versa. |
format | Online Article Text |
id | pubmed-5471260 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-54712602017-06-19 Associations between radiologist-defined semantic and automatically computed radiomic features in non-small cell lung cancer Yip, Stephen S. F. Liu, Ying Parmar, Chintan Li, Qian Liu, Shichang Qu, Fangyuan Ye, Zhaoxiang Gillies, Robert J. Aerts, Hugo J. W. L. Sci Rep Article Tumor phenotypes captured in computed tomography (CT) images can be described qualitatively and quantitatively using radiologist-defined “semantic” and computer-derived “radiomic” features, respectively. While both types of features have shown to be promising predictors of prognosis, the association between these groups of features remains unclear. We investigated the associations between semantic and radiomic features in CT images of 258 non-small cell lung adenocarcinomas. The tumor imaging phenotypes were described using 9 qualitative semantic features that were scored by radiologists, and 57 quantitative radiomic features that were automatically calculated using mathematical algorithms. Of the 9 semantic features, 3 were rated on a binary scale (cavitation, air bronchogram, and calcification) and 6 were rated on a categorical scale (texture, border definition, contour, lobulation, spiculation, and concavity). 32–41 radiomic features were associated with the binary semantic features (AUC = 0.56–0.76). The relationship between all radiomic features and the categorical semantic features ranged from weak to moderate (|Spearmen’s correlation| = 0.002–0.65). There are associations between semantic and radiomic features, however the associations were not strong despite being significant. Our results indicate that radiomic features may capture distinct tumor phenotypes that fail to be perceived by naked eye that semantic features do not describe and vice versa. Nature Publishing Group UK 2017-06-14 /pmc/articles/PMC5471260/ /pubmed/28615677 http://dx.doi.org/10.1038/s41598-017-02425-5 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Yip, Stephen S. F. Liu, Ying Parmar, Chintan Li, Qian Liu, Shichang Qu, Fangyuan Ye, Zhaoxiang Gillies, Robert J. Aerts, Hugo J. W. L. Associations between radiologist-defined semantic and automatically computed radiomic features in non-small cell lung cancer |
title | Associations between radiologist-defined semantic and automatically computed radiomic features in non-small cell lung cancer |
title_full | Associations between radiologist-defined semantic and automatically computed radiomic features in non-small cell lung cancer |
title_fullStr | Associations between radiologist-defined semantic and automatically computed radiomic features in non-small cell lung cancer |
title_full_unstemmed | Associations between radiologist-defined semantic and automatically computed radiomic features in non-small cell lung cancer |
title_short | Associations between radiologist-defined semantic and automatically computed radiomic features in non-small cell lung cancer |
title_sort | associations between radiologist-defined semantic and automatically computed radiomic features in non-small cell lung cancer |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5471260/ https://www.ncbi.nlm.nih.gov/pubmed/28615677 http://dx.doi.org/10.1038/s41598-017-02425-5 |
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