Cargando…

Integrative analysis of DNA methylation, mRNAs, and small RNAs during maize embryo dedifferentiation

BACKGROUND: Maize (Zea mays) is an important model crop for transgenic studies. However, genetic transformation of maize requires embryonic calli derived from immature embryo, and the impact of utilizing tissue culture methods on the maize epigenome is poorly understood. Here, we generated whole-gen...

Descripción completa

Detalles Bibliográficos
Autores principales:	Liu, Hongjun, Ma, Langlang, Yang, Xuerong, Zhang, Lin, Zeng, Xing, Xie, Shupeng, Peng, Huanwei, Gao, Shibin, Lin, Haijian, Pan, Guangtang, Wu, Yongrui, Shen, Yaou
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2017
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5472921/ https://www.ncbi.nlm.nih.gov/pubmed/28619030 http://dx.doi.org/10.1186/s12870-017-1055-x

Ejemplares similares

Genome Expression Profile Analysis of the Immature Maize Embryo during Dedifferentiation
por: Shen, Yaou, et al.
Publicado: (2012)

Integrated analysis of long non-coding RNAs and mRNAs reveals the regulatory network of maize seedling root responding to salt stress
por: Liu, Peng, et al.
Publicado: (2022)

Endogenous small interfering RNAs associated with maize embryonic callus formation
por: Ge, Fei, et al.
Publicado: (2017)

Metabolomic and Proteomic Analysis of Maize Embryonic Callus induced from immature embryo
por: Ge, Fei, et al.
Publicado: (2017)

Identification of miRNAs and their target genes in developing maize ears by combined small RNA and degradome sequencing
por: Liu, Hongjun, et al.
Publicado: (2014)

Cloning and characterization of miRNAs from maize seedling roots under low phosphorus stress
por: Zhang, Zhiming, et al.
Publicado: (2012)

A Combination of a Genome-Wide Association Study and a Transcriptome Analysis Reveals circRNAs as New Regulators Involved in the Response to Salt Stress in Maize
por: Liu, Peng, et al.
Publicado: (2022)

Transcription Factors Responding to Pb Stress in Maize
por: Zhang, Yanling, et al.
Publicado: (2017)

The Dynamics of DNA Methylation in Maize Roots under Pb Stress
por: Ding, Haiping, et al.
Publicado: (2014)

Association mapping uncovers maize ZmbZIP107 regulating root system architecture and lead absorption under lead stress
por: Hou, Fengxia, et al.
Publicado: (2022)

Analysis of the genetic architecture of maize kernel size traits by combined linkage and association mapping
por: Liu, Min, et al.
Publicado: (2019)

Genome-Wide Identification and Analysis of Drought-Responsive Genes and MicroRNAs in Tobacco
por: Yin, Fuqiang, et al.
Publicado: (2013)

Genome-wide association study uncovers new genetic loci and candidate genes underlying seed chilling-germination in maize
por: Zhang, Yinchao, et al.
Publicado: (2021)

Heterosis in Early Maize Ear Inflorescence Development: A Genome-Wide Transcription Analysis for Two Maize Inbred Lines and Their Hybrid
por: Ding, Haiping, et al.
Publicado: (2014)

Engineered Expression of Vip3A in Green Tissues as a Feasible Approach for the Control of Insect Pests in Maize
por: Yuan, Guangsheng, et al.
Publicado: (2023)

Genome-wide association analysis and QTL mapping reveal the genetic control of cadmium accumulation in maize leaf
por: Zhao, Xiongwei, et al.
Publicado: (2018)

Combined QTL Mapping across Multiple Environments and Co-Expression Network Analysis Identified Key Genes for Embryogenic Callus Induction from Immature Maize Embryos
por: Long, Yun, et al.
Publicado: (2022)

Genetic Dissection of Maize Embryonic Callus Regenerative Capacity Using Multi-Locus Genome-Wide Association Studies
por: Ma, Langlang, et al.
Publicado: (2018)

Genome-Wide Association Study Reveals the Genetic Basis of Kernel and Cob Moisture Changes in Maize at Physiological Maturity Stage
por: Zhang, Minyan, et al.
Publicado: (2022)

Germline inherited small RNAs facilitate the clearance of untranslated maternal mRNAs in C. elegans embryos
por: Quarato, Piergiuseppe, et al.
Publicado: (2021)

Comparative RNA-Seq Analysis Reveals That Regulatory Network of Maize Root Development Controls the Expression of Genes in Response to N Stress
por: He, Xiujing, et al.
Publicado: (2016)

Roles of piRNAs in transposon and pseudogene regulation of germline mRNAs and lncRNAs
por: Wang, Chen, et al.
Publicado: (2021)

An Integration of Linkage Mapping and GWAS Reveals the Key Genes for Ear Shank Length in Maize
por: Liang, Zhenjuan, et al.
Publicado: (2022)

Genome-wide identification of ZmHMAs and association of natural variation in ZmHMA2 and ZmHMA3 with leaf cadmium accumulation in maize
por: Cao, Yanhua, et al.
Publicado: (2019)

Differential regulation of the levels of three gap junction mRNAs in Xenopus embryos
Publicado: (1990)

Metabolite profiling and genome‐wide association studies reveal response mechanisms of phosphorus deficiency in maize seedling
por: Luo, Bowen, et al.
Publicado: (2019)

An Integrated Analysis of miRNAs and Methylated Genes Encoding mRNAs and lncRNAs in Sheep Breeds with Different Fecundity
por: Miao, Xiangyang, et al.
Publicado: (2017)

Transcriptome sequencing analysis of maize embryonic callus during early redifferentiation
por: Zhang, Xiaoling, et al.
Publicado: (2019)

To Be or Not to Be: Circular RNAs or mRNAs From Circular DNAs?
por: Iparraguirre, Leire, et al.
Publicado: (2019)

mRNAs held back
por: LeBrasseur, Nicole
Publicado: (2006)

Stress management for mRNAs
por: Short, Ben
Publicado: (2010)

Untranslated regions of mRNAs
por: Mignone, Flavio, et al.
Publicado: (2002)

Genome expression profile analysis of the maize sheath in response to inoculation to R. solani
por: Gao, Jian, et al.
Publicado: (2014)

Identification of Crucial lncRNAs, miRNAs, mRNAs, and Potential Therapeutic Compounds for Polycystic Ovary Syndrome by Bioinformatics Analysis
por: Zeng, Zhi, et al.
Publicado: (2020)

Using RNA-binding proteins for immunoprecipitation of mRNAs from Xenopus laevis embryos
por: Martynova, Natalia Y., et al.
Publicado: (2021)

LncRNAs and Chromatin Modifications Pattern m(6)A Methylation at the Untranslated Regions of mRNAs
por: Vaasjo, Lee O.
Publicado: (2022)

Imbalance learning for the prediction of N(6)-Methylation sites in mRNAs
por: Zhao, Zhixun, et al.
Publicado: (2018)

Identification of microRNAs and their Endonucleolytic Cleavaged target mRNAs in colorectal cancer
por: Zhou, Fangbin, et al.
Publicado: (2020)

MicroRNAs combined with the TLR4/TDAG8 mRNAs and proinflammatory cytokines are biomarkers for the rapid diagnosis of sepsis
por: Xu, Xiyuan, et al.
Publicado: (2022)

The influences of PRG-1 on the expression of small RNAs and mRNAs
por: Wang, Jia-Jia, et al.
Publicado: (2014)

Cannot write session to /tmp/vufind_sessions/sess_paq7gcm2c83obrdcvormpfpj7b