Cargando…

Understory Dwarf Bamboo Affects Microbial Community Structures and Soil Properties in a Betula ermanii Forest in Northern Japan

In order to understand the relationships between understory bamboo and soil properties, we compared microbial community structures in the soil of a Betula ermanii boreal forest with Sasa kurilensis present and removed using high-throughput DNA sequencing. The presence of understory S. kurilensis str...

Descripción completa

Detalles Bibliográficos
Autores principales: Kong, Bihe, Chen, Lei, Kasahara, Yasuhiro, Sumida, Akihiro, Ono, Kiyomi, Wild, Jan, Nagatake, Arata, Hatano, Ryusuke, Hara, Toshihiko
Formato: Online Artículo Texto
Lenguaje:English
Publicado: the Japanese Society of Microbial Ecology (JSME)/the Japanese Society of Soil Microbiology (JSSM)/the Taiwan Society of Microbial Ecology (TSME)/the Japanese Society of Plant Microbe Interactions (JSPMI) 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5478532/
https://www.ncbi.nlm.nih.gov/pubmed/28450660
http://dx.doi.org/10.1264/jsme2.ME16154
_version_ 1783244965128699904
author Kong, Bihe
Chen, Lei
Kasahara, Yasuhiro
Sumida, Akihiro
Ono, Kiyomi
Wild, Jan
Nagatake, Arata
Hatano, Ryusuke
Hara, Toshihiko
author_facet Kong, Bihe
Chen, Lei
Kasahara, Yasuhiro
Sumida, Akihiro
Ono, Kiyomi
Wild, Jan
Nagatake, Arata
Hatano, Ryusuke
Hara, Toshihiko
author_sort Kong, Bihe
collection PubMed
description In order to understand the relationships between understory bamboo and soil properties, we compared microbial community structures in the soil of a Betula ermanii boreal forest with Sasa kurilensis present and removed using high-throughput DNA sequencing. The presence of understory S. kurilensis strongly affected soil properties, including total carbon, total nitrogen, nitrate, and the C:N ratio as well as relative soil moisture. Marked differences were also noted in fungal and bacterial communities between plots. The relative abundance of the fungal phylum Ascomycota was 13.9% in the Sasa-intact plot and only 0.54% in the Sasa-removed plot. Among the Ascomycota fungi identified, the most prevalent were members of the family Pezizaceae. We found that the abundance of Pezizaceae, known to act as mycorrhizal fungi, was related to the amount of total carbon in the Sasa-intact plot. The relative abundance of Proteobacteria was significantly higher, whereas those of Planctomycetes and Actinobacteria were lower in the Sasa-intact plot than in the Sasa-removed plot. Furthermore, the results obtained suggest that some species of the phylum Planctomycetes are more likely to occur in the presence of S. kurilensis. Collectively, these results indicate that the presence of S. kurilensis affects microbial communities and soil properties in a B. ermanii boreal forest.
format Online
Article
Text
id pubmed-5478532
institution National Center for Biotechnology Information
language English
publishDate 2017
publisher the Japanese Society of Microbial Ecology (JSME)/the Japanese Society of Soil Microbiology (JSSM)/the Taiwan Society of Microbial Ecology (TSME)/the Japanese Society of Plant Microbe Interactions (JSPMI)
record_format MEDLINE/PubMed
spelling pubmed-54785322017-07-06 Understory Dwarf Bamboo Affects Microbial Community Structures and Soil Properties in a Betula ermanii Forest in Northern Japan Kong, Bihe Chen, Lei Kasahara, Yasuhiro Sumida, Akihiro Ono, Kiyomi Wild, Jan Nagatake, Arata Hatano, Ryusuke Hara, Toshihiko Microbes Environ Articles In order to understand the relationships between understory bamboo and soil properties, we compared microbial community structures in the soil of a Betula ermanii boreal forest with Sasa kurilensis present and removed using high-throughput DNA sequencing. The presence of understory S. kurilensis strongly affected soil properties, including total carbon, total nitrogen, nitrate, and the C:N ratio as well as relative soil moisture. Marked differences were also noted in fungal and bacterial communities between plots. The relative abundance of the fungal phylum Ascomycota was 13.9% in the Sasa-intact plot and only 0.54% in the Sasa-removed plot. Among the Ascomycota fungi identified, the most prevalent were members of the family Pezizaceae. We found that the abundance of Pezizaceae, known to act as mycorrhizal fungi, was related to the amount of total carbon in the Sasa-intact plot. The relative abundance of Proteobacteria was significantly higher, whereas those of Planctomycetes and Actinobacteria were lower in the Sasa-intact plot than in the Sasa-removed plot. Furthermore, the results obtained suggest that some species of the phylum Planctomycetes are more likely to occur in the presence of S. kurilensis. Collectively, these results indicate that the presence of S. kurilensis affects microbial communities and soil properties in a B. ermanii boreal forest. the Japanese Society of Microbial Ecology (JSME)/the Japanese Society of Soil Microbiology (JSSM)/the Taiwan Society of Microbial Ecology (TSME)/the Japanese Society of Plant Microbe Interactions (JSPMI) 2017-06 2017-04-28 /pmc/articles/PMC5478532/ /pubmed/28450660 http://dx.doi.org/10.1264/jsme2.ME16154 Text en Copyright © 2017 by Japanese Society of Microbial Ecology / Japanese Society of Soil Microbiology / Taiwan Society of Microbial Ecology / Japanese Society of Plant Microbe Interactions. http://creativecommons.org/licenses/by/3.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Articles
Kong, Bihe
Chen, Lei
Kasahara, Yasuhiro
Sumida, Akihiro
Ono, Kiyomi
Wild, Jan
Nagatake, Arata
Hatano, Ryusuke
Hara, Toshihiko
Understory Dwarf Bamboo Affects Microbial Community Structures and Soil Properties in a Betula ermanii Forest in Northern Japan
title Understory Dwarf Bamboo Affects Microbial Community Structures and Soil Properties in a Betula ermanii Forest in Northern Japan
title_full Understory Dwarf Bamboo Affects Microbial Community Structures and Soil Properties in a Betula ermanii Forest in Northern Japan
title_fullStr Understory Dwarf Bamboo Affects Microbial Community Structures and Soil Properties in a Betula ermanii Forest in Northern Japan
title_full_unstemmed Understory Dwarf Bamboo Affects Microbial Community Structures and Soil Properties in a Betula ermanii Forest in Northern Japan
title_short Understory Dwarf Bamboo Affects Microbial Community Structures and Soil Properties in a Betula ermanii Forest in Northern Japan
title_sort understory dwarf bamboo affects microbial community structures and soil properties in a betula ermanii forest in northern japan
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5478532/
https://www.ncbi.nlm.nih.gov/pubmed/28450660
http://dx.doi.org/10.1264/jsme2.ME16154
work_keys_str_mv AT kongbihe understorydwarfbambooaffectsmicrobialcommunitystructuresandsoilpropertiesinabetulaermaniiforestinnorthernjapan
AT chenlei understorydwarfbambooaffectsmicrobialcommunitystructuresandsoilpropertiesinabetulaermaniiforestinnorthernjapan
AT kasaharayasuhiro understorydwarfbambooaffectsmicrobialcommunitystructuresandsoilpropertiesinabetulaermaniiforestinnorthernjapan
AT sumidaakihiro understorydwarfbambooaffectsmicrobialcommunitystructuresandsoilpropertiesinabetulaermaniiforestinnorthernjapan
AT onokiyomi understorydwarfbambooaffectsmicrobialcommunitystructuresandsoilpropertiesinabetulaermaniiforestinnorthernjapan
AT wildjan understorydwarfbambooaffectsmicrobialcommunitystructuresandsoilpropertiesinabetulaermaniiforestinnorthernjapan
AT nagatakearata understorydwarfbambooaffectsmicrobialcommunitystructuresandsoilpropertiesinabetulaermaniiforestinnorthernjapan
AT hatanoryusuke understorydwarfbambooaffectsmicrobialcommunitystructuresandsoilpropertiesinabetulaermaniiforestinnorthernjapan
AT haratoshihiko understorydwarfbambooaffectsmicrobialcommunitystructuresandsoilpropertiesinabetulaermaniiforestinnorthernjapan