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Structural basis to stabilize the domain motion of BARD1-ARD BRCT by CstF50

BRCA1 associated ring domain protein 1(BARD1) is a tumor suppressor protein having a wide role in cellular processes like cell-cycle checkpoint, DNA damage repair and maintenance of genomic integrity. Germ-line mutation Gln 564 His discovered in linker region of BARD1 leads to loss of binding to Cle...

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Autores principales: Choudhary, Rajan Kumar, Siddiqui, Mohd Quadir, Thapa, Pankaj S., Gadewal, Nikhil, Nachimuthu, Senthil Kumar, Varma, Ashok K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5478621/
https://www.ncbi.nlm.nih.gov/pubmed/28634376
http://dx.doi.org/10.1038/s41598-017-03816-4
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author Choudhary, Rajan Kumar
Siddiqui, Mohd Quadir
Thapa, Pankaj S.
Gadewal, Nikhil
Nachimuthu, Senthil Kumar
Varma, Ashok K.
author_facet Choudhary, Rajan Kumar
Siddiqui, Mohd Quadir
Thapa, Pankaj S.
Gadewal, Nikhil
Nachimuthu, Senthil Kumar
Varma, Ashok K.
author_sort Choudhary, Rajan Kumar
collection PubMed
description BRCA1 associated ring domain protein 1(BARD1) is a tumor suppressor protein having a wide role in cellular processes like cell-cycle checkpoint, DNA damage repair and maintenance of genomic integrity. Germ-line mutation Gln 564 His discovered in linker region of BARD1 leads to loss of binding to Cleavage stimulating factor (CstF50), which in turn instigates the premature mRNA transcript formation and apoptosis. We have studied the dynamics of ARD domain present in the BARD1 wild-type and mutant protein in association with CstF50 using biophysical, biochemical and molecular dynamics simulations. It has been observed that the ARD domain is relatively more flexible than the BRCT domain of BARD1. Further relative orientations of both the ARD and BRCT domains varies due to the highly flexible nature of the connecting linker region present between the domains. It has been observed that mutant ARD domain is more dynamic in nature compared to wild-type protein. Molecular docking studies between BARD1 Gln 564 His mutant and CstF50 shows the loss of interactions. Furthermore, domain motion of ARD present in BARD1 was stabilized when complexed with CstF50.
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spelling pubmed-54786212017-06-23 Structural basis to stabilize the domain motion of BARD1-ARD BRCT by CstF50 Choudhary, Rajan Kumar Siddiqui, Mohd Quadir Thapa, Pankaj S. Gadewal, Nikhil Nachimuthu, Senthil Kumar Varma, Ashok K. Sci Rep Article BRCA1 associated ring domain protein 1(BARD1) is a tumor suppressor protein having a wide role in cellular processes like cell-cycle checkpoint, DNA damage repair and maintenance of genomic integrity. Germ-line mutation Gln 564 His discovered in linker region of BARD1 leads to loss of binding to Cleavage stimulating factor (CstF50), which in turn instigates the premature mRNA transcript formation and apoptosis. We have studied the dynamics of ARD domain present in the BARD1 wild-type and mutant protein in association with CstF50 using biophysical, biochemical and molecular dynamics simulations. It has been observed that the ARD domain is relatively more flexible than the BRCT domain of BARD1. Further relative orientations of both the ARD and BRCT domains varies due to the highly flexible nature of the connecting linker region present between the domains. It has been observed that mutant ARD domain is more dynamic in nature compared to wild-type protein. Molecular docking studies between BARD1 Gln 564 His mutant and CstF50 shows the loss of interactions. Furthermore, domain motion of ARD present in BARD1 was stabilized when complexed with CstF50. Nature Publishing Group UK 2017-06-20 /pmc/articles/PMC5478621/ /pubmed/28634376 http://dx.doi.org/10.1038/s41598-017-03816-4 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Choudhary, Rajan Kumar
Siddiqui, Mohd Quadir
Thapa, Pankaj S.
Gadewal, Nikhil
Nachimuthu, Senthil Kumar
Varma, Ashok K.
Structural basis to stabilize the domain motion of BARD1-ARD BRCT by CstF50
title Structural basis to stabilize the domain motion of BARD1-ARD BRCT by CstF50
title_full Structural basis to stabilize the domain motion of BARD1-ARD BRCT by CstF50
title_fullStr Structural basis to stabilize the domain motion of BARD1-ARD BRCT by CstF50
title_full_unstemmed Structural basis to stabilize the domain motion of BARD1-ARD BRCT by CstF50
title_short Structural basis to stabilize the domain motion of BARD1-ARD BRCT by CstF50
title_sort structural basis to stabilize the domain motion of bard1-ard brct by cstf50
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5478621/
https://www.ncbi.nlm.nih.gov/pubmed/28634376
http://dx.doi.org/10.1038/s41598-017-03816-4
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