Cargando…

Helical reconstruction in RELION

We describe a new implementation for the reconstruction of helical assemblies in the empirical Bayesian framework of RELION. Our approach calculates optimal linear filters for the 3D reconstruction by embedding helical symmetry operators in Fourier-space, and deals with deviations from perfect helic...

Descripción completa

Detalles Bibliográficos
Autores principales:	He, Shaoda, Scheres, Sjors H.W.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Academic Press 2017
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5479445/ https://www.ncbi.nlm.nih.gov/pubmed/28193500 http://dx.doi.org/10.1016/j.jsb.2017.02.003

Ejemplares similares

RELION: Implementation of a Bayesian approach to cryo-EM structure determination
por: Scheres, Sjors H.W.
Publicado: (2012)

Semi-automated selection of cryo-EM particles in RELION-1.3
por: Scheres, Sjors H.W.
Publicado: (2015)

Amyloid structure determination in RELION-3.1
por: Scheres, Sjors H. W.
Publicado: (2020)

A pipeline approach to single-particle processing in RELION
por: Fernandez-Leiro, Rafael, et al.
Publicado: (2017)

Accelerated cryo-EM structure determination with parallelisation using GPUs in RELION-2
por: Kimanius, Dari, et al.
Publicado: (2016)

Characterisation of molecular motions in cryo-EM single-particle data by multi-body refinement in RELION
por: Nakane, Takanori, et al.
Publicado: (2018)

New tools for automated high-resolution cryo-EM structure determination in RELION-3
por: Zivanov, Jasenko, et al.
Publicado: (2018)

New tools for automated cryo-EM single-particle analysis in RELION-4.0
por: Kimanius, Dari, et al.
Publicado: (2021)

Estimation of high-order aberrations and anisotropic magnification from cryo-EM data sets in RELION-3.1
por: Zivanov, Jasenko, et al.
Publicado: (2020)

A Bayesian approach to single-particle electron cryo-tomography in RELION-4.0
por: Zivanov, Jasenko, et al.
Publicado: (2022)

Cryo-EM of dynein microtubule-binding domains shows how an axonemal dynein distorts the microtubule
por: Lacey, Samuel E, et al.
Publicado: (2019)

A Bayesian View on Cryo-EM Structure Determination
por: Scheres, Sjors H.W.
Publicado: (2012)

Using RELION software within the Scipion framework
por: Sharov, Grigory, et al.
Publicado: (2021)

Atomic Structure of Type VI Contractile Sheath from Pseudomonas aeruginosa
por: Salih, Osman, et al.
Publicado: (2018)

Beam-induced motion correction for sub-megadalton cryo-EM particles
por: Scheres, Sjors HW
Publicado: (2014)

A microtubule RELION-based pipeline for cryo-EM image processing
por: Cook, Alexander D., et al.
Publicado: (2020)

Cryo-EM structures of Tau filaments from Alzheimer’s disease brain
por: Fitzpatrick, Anthony W.P., et al.
Publicado: (2017)

Structure of the Mammalian Ribosome-Sec61 Complex to 3.4 Å Resolution
por: Voorhees, Rebecca M., et al.
Publicado: (2014)

CryoEM structure of MxB reveals a novel oligomerization interface critical for HIV restriction
por: Alvarez, Frances J. D., et al.
Publicado: (2017)

Initiation of Translation by Cricket Paralysis Virus IRES Requires Its Translocation in the Ribosome
por: Fernández, Israel S., et al.
Publicado: (2014)

cryo-EM structures of the E. coli replicative DNA polymerase reveal its dynamic interactions with the DNA sliding clamp, exonuclease and τ
por: Fernandez-Leiro, Rafael, et al.
Publicado: (2015)

Structure of Active, Dimeric Human Telomerase
por: Sauerwald, Anselm, et al.
Publicado: (2013)

Automated model building and protein identification in cryo-EM maps
por: Jamali, Kiarash, et al.
Publicado: (2023)

Ribosome structures to near-atomic resolution from thirty thousand cryo-EM particles
por: Bai, Xiao-chen, et al.
Publicado: (2013)

Sampling the conformational space of the catalytic subunit of human γ-secretase
por: Bai, Xiao-chen, et al.
Publicado: (2015)

Ambiguities in helical reconstruction
por: Egelman, Edward H
Publicado: (2014)

Advances in Single-Particle Electron Cryomicroscopy Structure Determination applied to Sub-tomogram Averaging
por: Bharat, Tanmay A.M., et al.
Publicado: (2015)

Structure of the Fanconi anemia monoubiquitin ligase complex
por: Shakeel, Shabih, et al.
Publicado: (2019)

High-throughput cryo-EM structure determination of amyloids
por: Lövestam, Sofia, et al.
Publicado: (2022)

Cryo-EM structures of tau filaments from the brains of mice transgenic for human mutant P301S Tau
por: Schweighauser, Manuel, et al.
Publicado: (2023)

Introducing robustness to maximum-likelihood refinement of electron-microsopy data
por: Scheres, Sjors H. W., et al.
Publicado: (2009)

Cryo-EM structure of a separase-securin complex at near-atomic resolution
por: Boland, Andreas, et al.
Publicado: (2017)

High-resolution noise substitution to measure overfitting and validate resolution in 3D structure determination by single particle electron cryomicroscopy()
por: Chen, Shaoxia, et al.
Publicado: (2013)

Atomic structure of the apoptosome: mechanism of cytochrome c- and dATP-mediated activation of Apaf-1
por: Zhou, Mengying, et al.
Publicado: (2015)

Subunit Positioning and Stator Filament Stiffness in Regulation and Power Transmission in the V(1) Motor of the Manduca sexta V-ATPase()
por: Muench, Stephen P., et al.
Publicado: (2014)

A Bayesian approach to beam-induced motion correction in cryo-EM single-particle analysis
por: Zivanov, Jasenko, et al.
Publicado: (2019)

Structure of the apoptosome: mechanistic insights into activation of an initiator caspase from Drosophila
por: Pang, Yuxuan, et al.
Publicado: (2015)

Heparin-induced tau filaments are polymorphic and differ from those in Alzheimer’s and Pick’s diseases
por: Zhang, Wenjuan, et al.
Publicado: (2019)

Cryo-EM Structures of Chronic Traumatic Encephalopathy Tau Filaments with PET Ligand Flortaucipir
por: Shi, Yang, et al.
Publicado: (2023)

Escaping the symmetry trap in helical reconstruction
por: Gambelli, Lavinia, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_dfdqt4c85q2drld0d2gekrvbcs