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Feature Selection Methods for Zero-Shot Learning of Neural Activity
Dimensionality poses a serious challenge when making predictions from human neuroimaging data. Across imaging modalities, large pools of potential neural features (e.g., responses from particular voxels, electrodes, and temporal windows) have to be related to typically limited sets of stimuli and sa...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5481359/ https://www.ncbi.nlm.nih.gov/pubmed/28690513 http://dx.doi.org/10.3389/fninf.2017.00041 |
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author | Caceres, Carlos A. Roos, Matthew J. Rupp, Kyle M. Milsap, Griffin Crone, Nathan E. Wolmetz, Michael E. Ratto, Christopher R. |
author_facet | Caceres, Carlos A. Roos, Matthew J. Rupp, Kyle M. Milsap, Griffin Crone, Nathan E. Wolmetz, Michael E. Ratto, Christopher R. |
author_sort | Caceres, Carlos A. |
collection | PubMed |
description | Dimensionality poses a serious challenge when making predictions from human neuroimaging data. Across imaging modalities, large pools of potential neural features (e.g., responses from particular voxels, electrodes, and temporal windows) have to be related to typically limited sets of stimuli and samples. In recent years, zero-shot prediction models have been introduced for mapping between neural signals and semantic attributes, which allows for classification of stimulus classes not explicitly included in the training set. While choices about feature selection can have a substantial impact when closed-set accuracy, open-set robustness, and runtime are competing design objectives, no systematic study of feature selection for these models has been reported. Instead, a relatively straightforward feature stability approach has been adopted and successfully applied across models and imaging modalities. To characterize the tradeoffs in feature selection for zero-shot learning, we compared correlation-based stability to several other feature selection techniques on comparable data sets from two distinct imaging modalities: functional Magnetic Resonance Imaging and Electrocorticography. While most of the feature selection methods resulted in similar zero-shot prediction accuracies and spatial/spectral patterns of selected features, there was one exception; A novel feature/attribute correlation approach was able to achieve those accuracies with far fewer features, suggesting the potential for simpler prediction models that yield high zero-shot classification accuracy. |
format | Online Article Text |
id | pubmed-5481359 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-54813592017-07-07 Feature Selection Methods for Zero-Shot Learning of Neural Activity Caceres, Carlos A. Roos, Matthew J. Rupp, Kyle M. Milsap, Griffin Crone, Nathan E. Wolmetz, Michael E. Ratto, Christopher R. Front Neuroinform Neuroscience Dimensionality poses a serious challenge when making predictions from human neuroimaging data. Across imaging modalities, large pools of potential neural features (e.g., responses from particular voxels, electrodes, and temporal windows) have to be related to typically limited sets of stimuli and samples. In recent years, zero-shot prediction models have been introduced for mapping between neural signals and semantic attributes, which allows for classification of stimulus classes not explicitly included in the training set. While choices about feature selection can have a substantial impact when closed-set accuracy, open-set robustness, and runtime are competing design objectives, no systematic study of feature selection for these models has been reported. Instead, a relatively straightforward feature stability approach has been adopted and successfully applied across models and imaging modalities. To characterize the tradeoffs in feature selection for zero-shot learning, we compared correlation-based stability to several other feature selection techniques on comparable data sets from two distinct imaging modalities: functional Magnetic Resonance Imaging and Electrocorticography. While most of the feature selection methods resulted in similar zero-shot prediction accuracies and spatial/spectral patterns of selected features, there was one exception; A novel feature/attribute correlation approach was able to achieve those accuracies with far fewer features, suggesting the potential for simpler prediction models that yield high zero-shot classification accuracy. Frontiers Media S.A. 2017-06-23 /pmc/articles/PMC5481359/ /pubmed/28690513 http://dx.doi.org/10.3389/fninf.2017.00041 Text en Copyright © 2017 Caceres, Roos, Rupp, Milsap, Crone, Wolmetz and Ratto. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Caceres, Carlos A. Roos, Matthew J. Rupp, Kyle M. Milsap, Griffin Crone, Nathan E. Wolmetz, Michael E. Ratto, Christopher R. Feature Selection Methods for Zero-Shot Learning of Neural Activity |
title | Feature Selection Methods for Zero-Shot Learning of Neural Activity |
title_full | Feature Selection Methods for Zero-Shot Learning of Neural Activity |
title_fullStr | Feature Selection Methods for Zero-Shot Learning of Neural Activity |
title_full_unstemmed | Feature Selection Methods for Zero-Shot Learning of Neural Activity |
title_short | Feature Selection Methods for Zero-Shot Learning of Neural Activity |
title_sort | feature selection methods for zero-shot learning of neural activity |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5481359/ https://www.ncbi.nlm.nih.gov/pubmed/28690513 http://dx.doi.org/10.3389/fninf.2017.00041 |
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