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Feature Selection Methods for Zero-Shot Learning of Neural Activity

Dimensionality poses a serious challenge when making predictions from human neuroimaging data. Across imaging modalities, large pools of potential neural features (e.g., responses from particular voxels, electrodes, and temporal windows) have to be related to typically limited sets of stimuli and sa...

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Autores principales: Caceres, Carlos A., Roos, Matthew J., Rupp, Kyle M., Milsap, Griffin, Crone, Nathan E., Wolmetz, Michael E., Ratto, Christopher R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5481359/
https://www.ncbi.nlm.nih.gov/pubmed/28690513
http://dx.doi.org/10.3389/fninf.2017.00041
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author Caceres, Carlos A.
Roos, Matthew J.
Rupp, Kyle M.
Milsap, Griffin
Crone, Nathan E.
Wolmetz, Michael E.
Ratto, Christopher R.
author_facet Caceres, Carlos A.
Roos, Matthew J.
Rupp, Kyle M.
Milsap, Griffin
Crone, Nathan E.
Wolmetz, Michael E.
Ratto, Christopher R.
author_sort Caceres, Carlos A.
collection PubMed
description Dimensionality poses a serious challenge when making predictions from human neuroimaging data. Across imaging modalities, large pools of potential neural features (e.g., responses from particular voxels, electrodes, and temporal windows) have to be related to typically limited sets of stimuli and samples. In recent years, zero-shot prediction models have been introduced for mapping between neural signals and semantic attributes, which allows for classification of stimulus classes not explicitly included in the training set. While choices about feature selection can have a substantial impact when closed-set accuracy, open-set robustness, and runtime are competing design objectives, no systematic study of feature selection for these models has been reported. Instead, a relatively straightforward feature stability approach has been adopted and successfully applied across models and imaging modalities. To characterize the tradeoffs in feature selection for zero-shot learning, we compared correlation-based stability to several other feature selection techniques on comparable data sets from two distinct imaging modalities: functional Magnetic Resonance Imaging and Electrocorticography. While most of the feature selection methods resulted in similar zero-shot prediction accuracies and spatial/spectral patterns of selected features, there was one exception; A novel feature/attribute correlation approach was able to achieve those accuracies with far fewer features, suggesting the potential for simpler prediction models that yield high zero-shot classification accuracy.
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spelling pubmed-54813592017-07-07 Feature Selection Methods for Zero-Shot Learning of Neural Activity Caceres, Carlos A. Roos, Matthew J. Rupp, Kyle M. Milsap, Griffin Crone, Nathan E. Wolmetz, Michael E. Ratto, Christopher R. Front Neuroinform Neuroscience Dimensionality poses a serious challenge when making predictions from human neuroimaging data. Across imaging modalities, large pools of potential neural features (e.g., responses from particular voxels, electrodes, and temporal windows) have to be related to typically limited sets of stimuli and samples. In recent years, zero-shot prediction models have been introduced for mapping between neural signals and semantic attributes, which allows for classification of stimulus classes not explicitly included in the training set. While choices about feature selection can have a substantial impact when closed-set accuracy, open-set robustness, and runtime are competing design objectives, no systematic study of feature selection for these models has been reported. Instead, a relatively straightforward feature stability approach has been adopted and successfully applied across models and imaging modalities. To characterize the tradeoffs in feature selection for zero-shot learning, we compared correlation-based stability to several other feature selection techniques on comparable data sets from two distinct imaging modalities: functional Magnetic Resonance Imaging and Electrocorticography. While most of the feature selection methods resulted in similar zero-shot prediction accuracies and spatial/spectral patterns of selected features, there was one exception; A novel feature/attribute correlation approach was able to achieve those accuracies with far fewer features, suggesting the potential for simpler prediction models that yield high zero-shot classification accuracy. Frontiers Media S.A. 2017-06-23 /pmc/articles/PMC5481359/ /pubmed/28690513 http://dx.doi.org/10.3389/fninf.2017.00041 Text en Copyright © 2017 Caceres, Roos, Rupp, Milsap, Crone, Wolmetz and Ratto. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Caceres, Carlos A.
Roos, Matthew J.
Rupp, Kyle M.
Milsap, Griffin
Crone, Nathan E.
Wolmetz, Michael E.
Ratto, Christopher R.
Feature Selection Methods for Zero-Shot Learning of Neural Activity
title Feature Selection Methods for Zero-Shot Learning of Neural Activity
title_full Feature Selection Methods for Zero-Shot Learning of Neural Activity
title_fullStr Feature Selection Methods for Zero-Shot Learning of Neural Activity
title_full_unstemmed Feature Selection Methods for Zero-Shot Learning of Neural Activity
title_short Feature Selection Methods for Zero-Shot Learning of Neural Activity
title_sort feature selection methods for zero-shot learning of neural activity
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5481359/
https://www.ncbi.nlm.nih.gov/pubmed/28690513
http://dx.doi.org/10.3389/fninf.2017.00041
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