Cargando…

A Comprehensive Mouse Transcriptomic BodyMap across 17 Tissues by RNA-seq

The mouse has been widely used as a model organism for studying human diseases and for evaluating drug safety and efficacy. Many diseases and drug effects exhibit tissue specificity that may be reflected by tissue-specific gene-expression profiles. Here we construct a comprehensive mouse transcripto...

Descripción completa

Detalles Bibliográficos
Autores principales:	Li, Bin, Qing, Tao, Zhu, Jinhang, Wen, Zhuo, Yu, Ying, Fukumura, Ryutaro, Zheng, Yuanting, Gondo, Yoichi, Shi, Leming
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group UK 2017
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5482823/ https://www.ncbi.nlm.nih.gov/pubmed/28646208 http://dx.doi.org/10.1038/s41598-017-04520-z

Ejemplares similares

A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
por: Yu, Ying, et al.
Publicado: (2014)

Rat BodyMap transcriptomes reveal unique circular RNA features across tissue types and developmental stages
por: Zhou, Tong, et al.
Publicado: (2018)

A pig BodyMap transcriptome reveals diverse tissue physiologies and evolutionary dynamics of transcription
por: Jin, Long, et al.
Publicado: (2021)

BodyMap-Xs: anatomical breakdown of 17 million animal ESTs for cross-species comparison of gene expression
por: Ogasawara, Osamu, et al.
Publicado: (2006)

Identification of Tissue-Specific Protein-Coding and Noncoding Transcripts across 14 Human Tissues Using RNA-seq
por: Zhu, Jinhang, et al.
Publicado: (2016)

Illegitimate translation causes unexpected gene expression from on-target out-of-frame alleles created by CRISPR-Cas9
por: Makino, Shigeru, et al.
Publicado: (2016)

Comprehensive microRNA-seq transcriptomic profiling across 11 organs, 4 ages, and 2 sexes of Fischer 344 rats
por: Yao, Xintong, et al.
Publicado: (2022)

Expression profiling and functional annotation of noncoding genes across 11 distinct organs in rat development
por: Wen, Zhuo, et al.
Publicado: (2016)

Comprehensive RNA-Seq transcriptomic profiling across 11 organs, 4 ages, and 2 sexes of Fischer 344 rats
por: Yu, Ying, et al.
Publicado: (2014)

An ENU-induced p.C225S missense mutation in the mouse Tgfb1 gene does not cause Camurati-Engelmann disease-like skeletal phenotypes
por: Ichimura, Satoki, et al.
Publicado: (2016)

Transcriptomic profiling of rat liver samples in a comprehensive study design by RNA-Seq
por: Gong, Binsheng, et al.
Publicado: (2014)

Effects of background mutations and single nucleotide polymorphisms (SNPs) on the Disc1 L100P behavioral phenotype associated with schizophrenia in mice
por: Arime, Yosefu, et al.
Publicado: (2014)

A comprehensive genomic and transcriptomic dataset of triple-negative breast cancers
por: Chen, Qingwang, et al.
Publicado: (2022)

A comprehensive rat transcriptome built from large scale RNA-seq-based annotation
por: Ji, Xiangjun, et al.
Publicado: (2020)

8-oxoguanine causes spontaneous de novo germline mutations in mice
por: Ohno, Mizuki, et al.
Publicado: (2014)

T396I Mutation of Mouse Sufu Reduces the Stability and Activity of Gli3 Repressor
por: Makino, Shigeru, et al.
Publicado: (2015)

Exploring functions of long noncoding RNAs across multiple cancers through co-expression network
por: Li, Suqing, et al.
Publicado: (2017)

Keth-seq for transcriptome-wide RNA structure mapping
por: Weng, Xiaocheng, et al.
Publicado: (2020)

Dissecting the Characteristics and Dynamics of Human Protein Complexes at Transcriptome Cascade Using RNA-Seq Data
por: Chen, Geng, et al.
Publicado: (2013)

Comprehensive RNA-seq transcriptomic profiling in the malignant progression of gliomas
por: Zhao, Zheng, et al.
Publicado: (2017)

Topographical transcriptome mapping of the mouse medial ganglionic eminence by spatially resolved RNA-seq
por: Zechel, Sabrina, et al.
Publicado: (2014)

β-catenin(C429S) mice exhibit sterility consequent to spatiotemporally sustained Wnt signalling in the internal genitalia
por: Murata, Takuya, et al.
Publicado: (2014)

Early embryonic mutations reveal dynamics of somatic and germ cell lineages in mice
por: Uchimura, Arikuni, et al.
Publicado: (2022)

Comparison of sequence variants in transcriptomic control regions across 17 mouse genomes
por: Nguyen, Cao, et al.
Publicado: (2014)

Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors
por: Orsini, Luisa, et al.
Publicado: (2016)

Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors
por: Orsini, Luisa, et al.
Publicado: (2017)

Cross-platform ultradeep transcriptomic profiling of human reference RNA samples by RNA-Seq
por: Xu, Joshua, et al.
Publicado: (2014)

RapMap: a rapid, sensitive and accurate tool for mapping RNA-seq reads to transcriptomes
por: Srivastava, Avi, et al.
Publicado: (2016)

RNA-seq based transcriptomic map reveals new insights into mouse salivary gland development and maturation
por: Gluck, Christian, et al.
Publicado: (2016)

Establishment of mouse line showing inducible priapism‐like phenotypes
por: Hashimoto, Daiki, et al.
Publicado: (2022)

Comprehensive analysis of RNA-seq data reveals the complexity of the transcriptome in Brassica rapa
por: Tong, Chaobo, et al.
Publicado: (2013)

Necklace: combining reference and assembled transcriptomes for more comprehensive RNA-Seq analysis
por: Davidson, Nadia M, et al.
Publicado: (2018)

Comprehensive RNA-Seq profiling to evaluate lactating sheep mammary gland transcriptome
por: Suárez-Vega, Aroa, et al.
Publicado: (2016)

A normalization strategy applied to HiCEP (an AFLP-based expression profiling) analysis: Toward the strict alignment of valid fragments across electrophoretic patterns
por: Kadota, Koji, et al.
Publicado: (2005)

A comprehensive evaluation of ensembl, RefSeq, and UCSC annotations in the context of RNA-seq read mapping and gene quantification
por: Zhao, Shanrong, et al.
Publicado: (2015)

Mapping a mammalian adult adrenal gland hierarchy across species by microwell-seq
por: Lai, Shujing, et al.
Publicado: (2020)

SeqGene: a comprehensive software solution for mining exome- and transcriptome- sequencing data
por: Deng, Xutao
Publicado: (2011)

A comprehensive network map of IL-17A signaling pathway
por: Rex, D. A. B., et al.
Publicado: (2022)

Tany-Seq: Integrated Analysis of the Mouse Tanycyte Transcriptome
por: Sullivan, Andrew I., et al.
Publicado: (2022)

Assessment of the Impact of Using a Reference Transcriptome in Mapping Short RNA-Seq Reads
por: Zhao, Shanrong
Publicado: (2014)

Cannot write session to /tmp/vufind_sessions/sess_m134gthj2090p7lsdeqt48ed0t