Cargando…

SNP identification in unamplified human genomic DNA with gold nanoparticle probes

Single nucleotide polymorphisms (SNPs) comprise the most abundant source of genetic variation in the human genome. SNPs may be linked to genetic predispositions, frank disorders or adverse drug responses, or they may serve as genetic markers in linkage disequilibrium analysis. Thus far, established...

Descripción completa

Detalles Bibliográficos
Autores principales:	Bao, Y. Paul, Huber, Martin, Wei, Tai-Fen, Marla, Sudhakar S., Storhoff, James J., Müller, Uwe R.
Formato:	Texto
Lenguaje:	English
Publicado:	Oxford University Press 2005
Materias:	Methods Online
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC548375/ https://www.ncbi.nlm.nih.gov/pubmed/15659576 http://dx.doi.org/10.1093/nar/gni017

Ejemplares similares

Nanoparticle-based detection and quantification of DNA with single nucleotide polymorphism (SNP) discrimination selectivity
por: Qin, Wei Jie, et al.
Publicado: (2007)

Facile SNP detection using bifunctional, cross-linking oligonucleotide probes
por: Peng, Xiaohua, et al.
Publicado: (2008)

Efficient self-assembly of DNA-functionalized fluorophores and gold nanoparticles with DNA functionalized silicon surfaces: the effect of oligomer spacers
por: Milton, James A., et al.
Publicado: (2013)

SNP-guided identification of monoallelic DNA-methylation events from enrichment-based sequencing data
por: Steyaert, Sandra, et al.
Publicado: (2014)

Evaluating oligonucleotide properties for DNA microarray probe design
por: Xia, Xiao-Qin, et al.
Publicado: (2010)

Hybridization modeling of oligonucleotide SNP arrays for accurate DNA copy number estimation
por: Wan, Lin, et al.
Publicado: (2009)

Enhancing the efficiency of a PCR using gold nanoparticles
por: Li, Min, et al.
Publicado: (2005)

Highly cost-efficient genome-wide association studies using DNA pools and dense SNP arrays
por: Macgregor, Stuart, et al.
Publicado: (2008)

SNP genotyping using alkali cleavage of RNA/DNA chimeras and MALDI time-of-flight mass spectrometry
por: Mauger, Florence, et al.
Publicado: (2006)

Genotyping and annotation of Affymetrix SNP arrays
por: Lamy, Philippe, et al.
Publicado: (2006)

Genotyping pooled DNA using 100K SNP microarrays: a step towards genomewide association scans
por: Meaburn, Emma, et al.
Publicado: (2006)

TaqMan probe array for quantitative detection of DNA targets
por: Liu, Heping, et al.
Publicado: (2006)

Electrochemical detection of mismatched DNA using a MutS probe
por: Cho, Minseon, et al.
Publicado: (2006)

Preferential access to genetic information from endogenous hominin ancient DNA and accurate quantitative SNP-typing via SPEX
por: Brotherton, Paul, et al.
Publicado: (2010)

SNP discovery by mismatch-targeting of Mu transposition
por: Orsini, Luisa, et al.
Publicado: (2007)

Novel DNA probes with low background and high hybridization-triggered fluorescence
por: Lukhtanov, Eugeny A., et al.
Publicado: (2007)

Fluorescent probes for the analysis of DNA strand scission in base excision repair
por: Matsumoto, Naoyuki, et al.
Publicado: (2010)

Combination probes with intercalating anchors and proximal fluorophores for DNA and RNA detection
por: Qiu, Jieqiong, et al.
Publicado: (2016)

Non-cross-linking gold nanoparticle aggregation as a detection method for single-base substitutions
por: Sato, Kae, et al.
Publicado: (2005)

Exonuclease III protection assay with FRET probe for detecting DNA-binding proteins
por: Wang, Jinke, et al.
Publicado: (2005)

Molecular Zipper: a fluorescent probe for real-time isothermal DNA amplification
por: Yi, Jizu, et al.
Publicado: (2006)

DNA and RNA editing without sequence limitation using the flap endonuclease 1 guided by hairpin DNA probes
por: Tian, Kun, et al.
Publicado: (2020)

PPC: an algorithm for accurate estimation of SNP allele frequencies in small equimolar pools of DNA using data from high density microarrays
por: Brohede, Jesper, et al.
Publicado: (2005)

Detection of rare mutant K-ras DNA in a single-tube reaction using peptide nucleic acid as both PCR clamp and sensor probe
por: Luo, Ji-Dung, et al.
Publicado: (2006)

SNP-specific extraction of haplotype-resolved targeted genomic regions
por: Dapprich, Johannes, et al.
Publicado: (2008)

Performance comparison of SNP detection tools with illumina exome sequencing data—an assessment using both family pedigree information and sample-matched SNP array data
por: Yi, Ming, et al.
Publicado: (2014)

An in vitro selection scheme for oligonucleotide probes to discriminate between closely related DNA sequences
por: Brukner, Ivan, et al.
Publicado: (2007)

BENA435, a new cell-permeant photoactivated green fluorescent DNA probe
por: Erve, Alexandra, et al.
Publicado: (2006)

DNA sampling: a method for probing protein binding at specific loci on bacterial chromosomes
por: Butala, Matej, et al.
Publicado: (2009)

Comprehensive characterization, annotation and innovative use of Infinium DNA methylation BeadChip probes
por: Zhou, Wanding, et al.
Publicado: (2017)

Multiplex SNP typing by bioluminometric assay coupled with terminator incorporation (BATI)
por: Zhou, Guo-Hua, et al.
Publicado: (2005)

Efficacy assessment of SNP sets for genome-wide disease association studies
por: Wollstein, Andreas, et al.
Publicado: (2007)

PyroHMMsnp: an SNP caller for Ion Torrent and 454 sequencing data
por: Zeng, Feng, et al.
Publicado: (2013)

Cell lineage inference from SNP and scRNA-Seq data
por: Ding, Jun, et al.
Publicado: (2019)

Single molecule linear analysis of DNA in nano-channel labeled with sequence specific fluorescent probes
por: Das, Somes K., et al.
Publicado: (2010)

Probing a label-free local bend in DNA by single molecule tethered particle motion
por: Brunet, Annaël, et al.
Publicado: (2015)

A branch-migration based fluorescent probe for straightforward, sensitive and specific discrimination of DNA mutations
por: Xiao, Xianjin, et al.
Publicado: (2017)

Identification of candidate regulatory SNPs by combination of transcription-factor-binding site prediction, SNP genotyping and haploChIP
por: Ameur, Adam, et al.
Publicado: (2009)

A real-time PCR-based method for determining the surface coverage of thiol-capped oligonucleotides bound onto gold nanoparticles
por: Kim, Eun-Young, et al.
Publicado: (2006)

Electrical detection of the temperature induced melting transition of a DNA hairpin covalently attached to gold interdigitated microelectrodes
por: Brewood, Greg P., et al.
Publicado: (2008)

Cannot write session to /tmp/vufind_sessions/sess_a3al3podb4cmfcm51b2k0qu1gb