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Identifying Bird Remains Using Ancient DNA Barcoding

Bird remains that are difficult to identify taxonomically using morphological methods, are common in the palaeontological record. Other types of challenging avian material include artefacts and food items from endangered taxa, as well as remains from aircraft strikes. We here present a DNA-based met...

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Autores principales: Dalén, Love, Lagerholm, Vendela K., Nylander, Johan A. A., Barton, Nick, Bochenski, Zbigniew M., Tomek, Teresa, Rudling, David, Ericson, Per G. P., Irestedt, Martin, Stewart, John R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5485533/
https://www.ncbi.nlm.nih.gov/pubmed/28635635
http://dx.doi.org/10.3390/genes8060169
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author Dalén, Love
Lagerholm, Vendela K.
Nylander, Johan A. A.
Barton, Nick
Bochenski, Zbigniew M.
Tomek, Teresa
Rudling, David
Ericson, Per G. P.
Irestedt, Martin
Stewart, John R.
author_facet Dalén, Love
Lagerholm, Vendela K.
Nylander, Johan A. A.
Barton, Nick
Bochenski, Zbigniew M.
Tomek, Teresa
Rudling, David
Ericson, Per G. P.
Irestedt, Martin
Stewart, John R.
author_sort Dalén, Love
collection PubMed
description Bird remains that are difficult to identify taxonomically using morphological methods, are common in the palaeontological record. Other types of challenging avian material include artefacts and food items from endangered taxa, as well as remains from aircraft strikes. We here present a DNA-based method that enables taxonomic identification of bird remains, even from material where the DNA is heavily degraded. The method is based on the amplification and sequencing of two short variable parts of the 16S region in the mitochondrial genome. To demonstrate the applicability of this approach, we evaluated the method on a set of Holocene and Late Pleistocene postcranial bird bones from several palaeontological and archaeological sites in Europe with good success.
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spelling pubmed-54855332017-06-29 Identifying Bird Remains Using Ancient DNA Barcoding Dalén, Love Lagerholm, Vendela K. Nylander, Johan A. A. Barton, Nick Bochenski, Zbigniew M. Tomek, Teresa Rudling, David Ericson, Per G. P. Irestedt, Martin Stewart, John R. Genes (Basel) Article Bird remains that are difficult to identify taxonomically using morphological methods, are common in the palaeontological record. Other types of challenging avian material include artefacts and food items from endangered taxa, as well as remains from aircraft strikes. We here present a DNA-based method that enables taxonomic identification of bird remains, even from material where the DNA is heavily degraded. The method is based on the amplification and sequencing of two short variable parts of the 16S region in the mitochondrial genome. To demonstrate the applicability of this approach, we evaluated the method on a set of Holocene and Late Pleistocene postcranial bird bones from several palaeontological and archaeological sites in Europe with good success. MDPI 2017-06-21 /pmc/articles/PMC5485533/ /pubmed/28635635 http://dx.doi.org/10.3390/genes8060169 Text en © 2017 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Dalén, Love
Lagerholm, Vendela K.
Nylander, Johan A. A.
Barton, Nick
Bochenski, Zbigniew M.
Tomek, Teresa
Rudling, David
Ericson, Per G. P.
Irestedt, Martin
Stewart, John R.
Identifying Bird Remains Using Ancient DNA Barcoding
title Identifying Bird Remains Using Ancient DNA Barcoding
title_full Identifying Bird Remains Using Ancient DNA Barcoding
title_fullStr Identifying Bird Remains Using Ancient DNA Barcoding
title_full_unstemmed Identifying Bird Remains Using Ancient DNA Barcoding
title_short Identifying Bird Remains Using Ancient DNA Barcoding
title_sort identifying bird remains using ancient dna barcoding
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5485533/
https://www.ncbi.nlm.nih.gov/pubmed/28635635
http://dx.doi.org/10.3390/genes8060169
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