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Versatility of nodal affiliation to communities
Graph theoretical analysis of the community structure of networks attempts to identify the communities (or modules) to which each node affiliates. However, this is in most cases an ill-posed problem, as the affiliation of a node to a single community is often ambiguous. Previous solutions have attem...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5487331/ https://www.ncbi.nlm.nih.gov/pubmed/28655911 http://dx.doi.org/10.1038/s41598-017-03394-5 |
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author | Shinn, Maxwell Romero-Garcia, Rafael Seidlitz, Jakob Váša, František Vértes, Petra E. Bullmore, Edward |
author_facet | Shinn, Maxwell Romero-Garcia, Rafael Seidlitz, Jakob Váša, František Vértes, Petra E. Bullmore, Edward |
author_sort | Shinn, Maxwell |
collection | PubMed |
description | Graph theoretical analysis of the community structure of networks attempts to identify the communities (or modules) to which each node affiliates. However, this is in most cases an ill-posed problem, as the affiliation of a node to a single community is often ambiguous. Previous solutions have attempted to identify all of the communities to which each node affiliates. Instead of taking this approach, we introduce versatility, V, as a novel metric of nodal affiliation: V ≈ 0 means that a node is consistently assigned to a specific community; V >> 0 means it is inconsistently assigned to different communities. Versatility works in conjunction with existing community detection algorithms, and it satisfies many theoretically desirable properties in idealised networks designed to maximise ambiguity of modular decomposition. The local minima of global mean versatility identified the resolution parameters of a hierarchical community detection algorithm that least ambiguously decomposed the community structure of a social (karate club) network and the mouse brain connectome. Our results suggest that nodal versatility is useful in quantifying the inherent ambiguity of modular decomposition. |
format | Online Article Text |
id | pubmed-5487331 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-54873312017-06-30 Versatility of nodal affiliation to communities Shinn, Maxwell Romero-Garcia, Rafael Seidlitz, Jakob Váša, František Vértes, Petra E. Bullmore, Edward Sci Rep Article Graph theoretical analysis of the community structure of networks attempts to identify the communities (or modules) to which each node affiliates. However, this is in most cases an ill-posed problem, as the affiliation of a node to a single community is often ambiguous. Previous solutions have attempted to identify all of the communities to which each node affiliates. Instead of taking this approach, we introduce versatility, V, as a novel metric of nodal affiliation: V ≈ 0 means that a node is consistently assigned to a specific community; V >> 0 means it is inconsistently assigned to different communities. Versatility works in conjunction with existing community detection algorithms, and it satisfies many theoretically desirable properties in idealised networks designed to maximise ambiguity of modular decomposition. The local minima of global mean versatility identified the resolution parameters of a hierarchical community detection algorithm that least ambiguously decomposed the community structure of a social (karate club) network and the mouse brain connectome. Our results suggest that nodal versatility is useful in quantifying the inherent ambiguity of modular decomposition. Nature Publishing Group UK 2017-06-27 /pmc/articles/PMC5487331/ /pubmed/28655911 http://dx.doi.org/10.1038/s41598-017-03394-5 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Shinn, Maxwell Romero-Garcia, Rafael Seidlitz, Jakob Váša, František Vértes, Petra E. Bullmore, Edward Versatility of nodal affiliation to communities |
title | Versatility of nodal affiliation to communities |
title_full | Versatility of nodal affiliation to communities |
title_fullStr | Versatility of nodal affiliation to communities |
title_full_unstemmed | Versatility of nodal affiliation to communities |
title_short | Versatility of nodal affiliation to communities |
title_sort | versatility of nodal affiliation to communities |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5487331/ https://www.ncbi.nlm.nih.gov/pubmed/28655911 http://dx.doi.org/10.1038/s41598-017-03394-5 |
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