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Identification of factors required for m(6)A mRNA methylation in Arabidopsis reveals a role for the conserved E3 ubiquitin ligase HAKAI

N6‐adenosine methylation (m(6)A) of mRNA is an essential process in most eukaryotes, but its role and the status of factors accompanying this modification are still poorly understood. Using combined methods of genetics, proteomics and RNA biochemistry, we identified a core set of mRNA m(6)A writer p...

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Autores principales: Růžička, Kamil, Zhang, Mi, Campilho, Ana, Bodi, Zsuzsanna, Kashif, Muhammad, Saleh, Mária, Eeckhout, Dominique, El‐Showk, Sedeer, Li, Hongying, Zhong, Silin, De Jaeger, Geert, Mongan, Nigel P., Hejátko, Jan, Helariutta, Ykä, Fray, Rupert G.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5488176/
https://www.ncbi.nlm.nih.gov/pubmed/28503769
http://dx.doi.org/10.1111/nph.14586
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author Růžička, Kamil
Zhang, Mi
Campilho, Ana
Bodi, Zsuzsanna
Kashif, Muhammad
Saleh, Mária
Eeckhout, Dominique
El‐Showk, Sedeer
Li, Hongying
Zhong, Silin
De Jaeger, Geert
Mongan, Nigel P.
Hejátko, Jan
Helariutta, Ykä
Fray, Rupert G.
author_facet Růžička, Kamil
Zhang, Mi
Campilho, Ana
Bodi, Zsuzsanna
Kashif, Muhammad
Saleh, Mária
Eeckhout, Dominique
El‐Showk, Sedeer
Li, Hongying
Zhong, Silin
De Jaeger, Geert
Mongan, Nigel P.
Hejátko, Jan
Helariutta, Ykä
Fray, Rupert G.
author_sort Růžička, Kamil
collection PubMed
description N6‐adenosine methylation (m(6)A) of mRNA is an essential process in most eukaryotes, but its role and the status of factors accompanying this modification are still poorly understood. Using combined methods of genetics, proteomics and RNA biochemistry, we identified a core set of mRNA m(6)A writer proteins in Arabidopsis thaliana. The components required for m(6)A in Arabidopsis included MTA, MTB, FIP37, VIRILIZER and the E3 ubiquitin ligase HAKAI. Downregulation of these proteins led to reduced relative m(6)A levels and shared pleiotropic phenotypes, which included aberrant vascular formation in the root, indicating that correct m(6)A methylation plays a role in developmental decisions during pattern formation. The conservation of these proteins amongst eukaryotes and the demonstration of a role in writing m(6)A for the E3 ubiquitin ligase HAKAI is likely to be of considerable relevance beyond the plant sciences.
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spelling pubmed-54881762017-07-13 Identification of factors required for m(6)A mRNA methylation in Arabidopsis reveals a role for the conserved E3 ubiquitin ligase HAKAI Růžička, Kamil Zhang, Mi Campilho, Ana Bodi, Zsuzsanna Kashif, Muhammad Saleh, Mária Eeckhout, Dominique El‐Showk, Sedeer Li, Hongying Zhong, Silin De Jaeger, Geert Mongan, Nigel P. Hejátko, Jan Helariutta, Ykä Fray, Rupert G. New Phytol Research N6‐adenosine methylation (m(6)A) of mRNA is an essential process in most eukaryotes, but its role and the status of factors accompanying this modification are still poorly understood. Using combined methods of genetics, proteomics and RNA biochemistry, we identified a core set of mRNA m(6)A writer proteins in Arabidopsis thaliana. The components required for m(6)A in Arabidopsis included MTA, MTB, FIP37, VIRILIZER and the E3 ubiquitin ligase HAKAI. Downregulation of these proteins led to reduced relative m(6)A levels and shared pleiotropic phenotypes, which included aberrant vascular formation in the root, indicating that correct m(6)A methylation plays a role in developmental decisions during pattern formation. The conservation of these proteins amongst eukaryotes and the demonstration of a role in writing m(6)A for the E3 ubiquitin ligase HAKAI is likely to be of considerable relevance beyond the plant sciences. John Wiley and Sons Inc. 2017-05-15 2017-07 /pmc/articles/PMC5488176/ /pubmed/28503769 http://dx.doi.org/10.1111/nph.14586 Text en © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research
Růžička, Kamil
Zhang, Mi
Campilho, Ana
Bodi, Zsuzsanna
Kashif, Muhammad
Saleh, Mária
Eeckhout, Dominique
El‐Showk, Sedeer
Li, Hongying
Zhong, Silin
De Jaeger, Geert
Mongan, Nigel P.
Hejátko, Jan
Helariutta, Ykä
Fray, Rupert G.
Identification of factors required for m(6)A mRNA methylation in Arabidopsis reveals a role for the conserved E3 ubiquitin ligase HAKAI
title Identification of factors required for m(6)A mRNA methylation in Arabidopsis reveals a role for the conserved E3 ubiquitin ligase HAKAI
title_full Identification of factors required for m(6)A mRNA methylation in Arabidopsis reveals a role for the conserved E3 ubiquitin ligase HAKAI
title_fullStr Identification of factors required for m(6)A mRNA methylation in Arabidopsis reveals a role for the conserved E3 ubiquitin ligase HAKAI
title_full_unstemmed Identification of factors required for m(6)A mRNA methylation in Arabidopsis reveals a role for the conserved E3 ubiquitin ligase HAKAI
title_short Identification of factors required for m(6)A mRNA methylation in Arabidopsis reveals a role for the conserved E3 ubiquitin ligase HAKAI
title_sort identification of factors required for m(6)a mrna methylation in arabidopsis reveals a role for the conserved e3 ubiquitin ligase hakai
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5488176/
https://www.ncbi.nlm.nih.gov/pubmed/28503769
http://dx.doi.org/10.1111/nph.14586
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