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Identification of factors required for m(6)A mRNA methylation in Arabidopsis reveals a role for the conserved E3 ubiquitin ligase HAKAI
N6‐adenosine methylation (m(6)A) of mRNA is an essential process in most eukaryotes, but its role and the status of factors accompanying this modification are still poorly understood. Using combined methods of genetics, proteomics and RNA biochemistry, we identified a core set of mRNA m(6)A writer p...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5488176/ https://www.ncbi.nlm.nih.gov/pubmed/28503769 http://dx.doi.org/10.1111/nph.14586 |
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author | Růžička, Kamil Zhang, Mi Campilho, Ana Bodi, Zsuzsanna Kashif, Muhammad Saleh, Mária Eeckhout, Dominique El‐Showk, Sedeer Li, Hongying Zhong, Silin De Jaeger, Geert Mongan, Nigel P. Hejátko, Jan Helariutta, Ykä Fray, Rupert G. |
author_facet | Růžička, Kamil Zhang, Mi Campilho, Ana Bodi, Zsuzsanna Kashif, Muhammad Saleh, Mária Eeckhout, Dominique El‐Showk, Sedeer Li, Hongying Zhong, Silin De Jaeger, Geert Mongan, Nigel P. Hejátko, Jan Helariutta, Ykä Fray, Rupert G. |
author_sort | Růžička, Kamil |
collection | PubMed |
description | N6‐adenosine methylation (m(6)A) of mRNA is an essential process in most eukaryotes, but its role and the status of factors accompanying this modification are still poorly understood. Using combined methods of genetics, proteomics and RNA biochemistry, we identified a core set of mRNA m(6)A writer proteins in Arabidopsis thaliana. The components required for m(6)A in Arabidopsis included MTA, MTB, FIP37, VIRILIZER and the E3 ubiquitin ligase HAKAI. Downregulation of these proteins led to reduced relative m(6)A levels and shared pleiotropic phenotypes, which included aberrant vascular formation in the root, indicating that correct m(6)A methylation plays a role in developmental decisions during pattern formation. The conservation of these proteins amongst eukaryotes and the demonstration of a role in writing m(6)A for the E3 ubiquitin ligase HAKAI is likely to be of considerable relevance beyond the plant sciences. |
format | Online Article Text |
id | pubmed-5488176 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-54881762017-07-13 Identification of factors required for m(6)A mRNA methylation in Arabidopsis reveals a role for the conserved E3 ubiquitin ligase HAKAI Růžička, Kamil Zhang, Mi Campilho, Ana Bodi, Zsuzsanna Kashif, Muhammad Saleh, Mária Eeckhout, Dominique El‐Showk, Sedeer Li, Hongying Zhong, Silin De Jaeger, Geert Mongan, Nigel P. Hejátko, Jan Helariutta, Ykä Fray, Rupert G. New Phytol Research N6‐adenosine methylation (m(6)A) of mRNA is an essential process in most eukaryotes, but its role and the status of factors accompanying this modification are still poorly understood. Using combined methods of genetics, proteomics and RNA biochemistry, we identified a core set of mRNA m(6)A writer proteins in Arabidopsis thaliana. The components required for m(6)A in Arabidopsis included MTA, MTB, FIP37, VIRILIZER and the E3 ubiquitin ligase HAKAI. Downregulation of these proteins led to reduced relative m(6)A levels and shared pleiotropic phenotypes, which included aberrant vascular formation in the root, indicating that correct m(6)A methylation plays a role in developmental decisions during pattern formation. The conservation of these proteins amongst eukaryotes and the demonstration of a role in writing m(6)A for the E3 ubiquitin ligase HAKAI is likely to be of considerable relevance beyond the plant sciences. John Wiley and Sons Inc. 2017-05-15 2017-07 /pmc/articles/PMC5488176/ /pubmed/28503769 http://dx.doi.org/10.1111/nph.14586 Text en © 2017 The Authors. New Phytologist © 2017 New Phytologist Trust This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Růžička, Kamil Zhang, Mi Campilho, Ana Bodi, Zsuzsanna Kashif, Muhammad Saleh, Mária Eeckhout, Dominique El‐Showk, Sedeer Li, Hongying Zhong, Silin De Jaeger, Geert Mongan, Nigel P. Hejátko, Jan Helariutta, Ykä Fray, Rupert G. Identification of factors required for m(6)A mRNA methylation in Arabidopsis reveals a role for the conserved E3 ubiquitin ligase HAKAI |
title | Identification of factors required for m(6)A mRNA methylation in Arabidopsis reveals a role for the conserved E3 ubiquitin ligase HAKAI |
title_full | Identification of factors required for m(6)A mRNA methylation in Arabidopsis reveals a role for the conserved E3 ubiquitin ligase HAKAI |
title_fullStr | Identification of factors required for m(6)A mRNA methylation in Arabidopsis reveals a role for the conserved E3 ubiquitin ligase HAKAI |
title_full_unstemmed | Identification of factors required for m(6)A mRNA methylation in Arabidopsis reveals a role for the conserved E3 ubiquitin ligase HAKAI |
title_short | Identification of factors required for m(6)A mRNA methylation in Arabidopsis reveals a role for the conserved E3 ubiquitin ligase HAKAI |
title_sort | identification of factors required for m(6)a mrna methylation in arabidopsis reveals a role for the conserved e3 ubiquitin ligase hakai |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5488176/ https://www.ncbi.nlm.nih.gov/pubmed/28503769 http://dx.doi.org/10.1111/nph.14586 |
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