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Contrasting bacterial communities in two indigenous Chionochloa (Poaceae) grassland soils in New Zealand

The cultivation of grasslands can modify both bacterial community structure and impact on nutrient cycling as well as the productivity and diversity of plant communities. In this study, two pristine New Zealand grassland sites dominated by indigenous tall tussocks (Chionochloa pallens or C. teretifo...

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Autores principales: Griffith, Jocelyn C., Lee, William G., Orlovich, David A., Summerfield, Tina C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5489180/
https://www.ncbi.nlm.nih.gov/pubmed/28658306
http://dx.doi.org/10.1371/journal.pone.0179652
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author Griffith, Jocelyn C.
Lee, William G.
Orlovich, David A.
Summerfield, Tina C.
author_facet Griffith, Jocelyn C.
Lee, William G.
Orlovich, David A.
Summerfield, Tina C.
author_sort Griffith, Jocelyn C.
collection PubMed
description The cultivation of grasslands can modify both bacterial community structure and impact on nutrient cycling as well as the productivity and diversity of plant communities. In this study, two pristine New Zealand grassland sites dominated by indigenous tall tussocks (Chionochloa pallens or C. teretifolia) were examined to investigate the extent and predictability of variation of the bacterial community. The contribution of free-living bacteria to biological nitrogen fixation is predicted to be ecologically significant in these soils; therefore, the diazotrophic community was also examined. The C. teretifolia site had N-poor and poorly-drained peaty soils, and the C. pallens had N-rich and well-drained fertile soils. These soils also differ in the proportion of organic carbon (C), Olsen phosphorus (P) and soil pH. The nutrient-rich soils showed increased relative abundances of some copiotrophic bacterial taxa (including members of the Proteobacteria, Bacteroidetes and Firmicutes phyla). Other copiotrophs, Actinobacteria and the oliogotrophic Acidobacteria showed increased relative abundance in nutrient-poor soils. Greater diversity based on 16S rRNA gene sequences and the Tax4Fun prediction of enhanced spore formation associated with nutrient-rich soils could indicate increased resilience of the bacterial community. The two sites had distinct diazotrophic communities with higher diversity in C. teretifolia soils that had less available nitrate and ammonium, potentially indicating increased resilience of the diazotroph community at this site. The C. teretifolia soils had more 16S rRNA gene and nifH copies per g soil than the nutrient rich site. However, the proportion of the bacterial community that was diazotrophic was similar in the two soils. We suggest that edaphic and vegetation factors are contributing to major differences in the composition and diversity of total bacterial and diazotrophic communities at these sites. We predict the differences in the communities at the two sites will result in different responses to environmental change.
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spelling pubmed-54891802017-07-11 Contrasting bacterial communities in two indigenous Chionochloa (Poaceae) grassland soils in New Zealand Griffith, Jocelyn C. Lee, William G. Orlovich, David A. Summerfield, Tina C. PLoS One Research Article The cultivation of grasslands can modify both bacterial community structure and impact on nutrient cycling as well as the productivity and diversity of plant communities. In this study, two pristine New Zealand grassland sites dominated by indigenous tall tussocks (Chionochloa pallens or C. teretifolia) were examined to investigate the extent and predictability of variation of the bacterial community. The contribution of free-living bacteria to biological nitrogen fixation is predicted to be ecologically significant in these soils; therefore, the diazotrophic community was also examined. The C. teretifolia site had N-poor and poorly-drained peaty soils, and the C. pallens had N-rich and well-drained fertile soils. These soils also differ in the proportion of organic carbon (C), Olsen phosphorus (P) and soil pH. The nutrient-rich soils showed increased relative abundances of some copiotrophic bacterial taxa (including members of the Proteobacteria, Bacteroidetes and Firmicutes phyla). Other copiotrophs, Actinobacteria and the oliogotrophic Acidobacteria showed increased relative abundance in nutrient-poor soils. Greater diversity based on 16S rRNA gene sequences and the Tax4Fun prediction of enhanced spore formation associated with nutrient-rich soils could indicate increased resilience of the bacterial community. The two sites had distinct diazotrophic communities with higher diversity in C. teretifolia soils that had less available nitrate and ammonium, potentially indicating increased resilience of the diazotroph community at this site. The C. teretifolia soils had more 16S rRNA gene and nifH copies per g soil than the nutrient rich site. However, the proportion of the bacterial community that was diazotrophic was similar in the two soils. We suggest that edaphic and vegetation factors are contributing to major differences in the composition and diversity of total bacterial and diazotrophic communities at these sites. We predict the differences in the communities at the two sites will result in different responses to environmental change. Public Library of Science 2017-06-28 /pmc/articles/PMC5489180/ /pubmed/28658306 http://dx.doi.org/10.1371/journal.pone.0179652 Text en © 2017 Griffith et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Griffith, Jocelyn C.
Lee, William G.
Orlovich, David A.
Summerfield, Tina C.
Contrasting bacterial communities in two indigenous Chionochloa (Poaceae) grassland soils in New Zealand
title Contrasting bacterial communities in two indigenous Chionochloa (Poaceae) grassland soils in New Zealand
title_full Contrasting bacterial communities in two indigenous Chionochloa (Poaceae) grassland soils in New Zealand
title_fullStr Contrasting bacterial communities in two indigenous Chionochloa (Poaceae) grassland soils in New Zealand
title_full_unstemmed Contrasting bacterial communities in two indigenous Chionochloa (Poaceae) grassland soils in New Zealand
title_short Contrasting bacterial communities in two indigenous Chionochloa (Poaceae) grassland soils in New Zealand
title_sort contrasting bacterial communities in two indigenous chionochloa (poaceae) grassland soils in new zealand
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5489180/
https://www.ncbi.nlm.nih.gov/pubmed/28658306
http://dx.doi.org/10.1371/journal.pone.0179652
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