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Recurrent mutation of IGF signalling genes and distinct patterns of genomic rearrangement in osteosarcoma

Osteosarcoma is a primary malignancy of bone that affects children and adults. Here, we present the largest sequencing study of osteosarcoma to date, comprising 112 childhood and adult tumours encompassing all major histological subtypes. A key finding of our study is the identification of mutations...

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Autores principales: Behjati, Sam, Tarpey, Patrick S., Haase, Kerstin, Ye, Hongtao, Young, Matthew D., Alexandrov, Ludmil B., Farndon, Sarah J., Collord, Grace, Wedge, David C., Martincorena, Inigo, Cooke, Susanna L., Davies, Helen, Mifsud, William, Lidgren, Mathias, Martin, Sancha, Latimer, Calli, Maddison, Mark, Butler, Adam P., Teague, Jon W., Pillay, Nischalan, Shlien, Adam, McDermott, Ultan, Futreal, P. Andrew, Baumhoer, Daniel, Zaikova, Olga, Bjerkehagen, Bodil, Myklebost, Ola, Amary, M. Fernanda, Tirabosco, Roberto, Van Loo, Peter, Stratton, Michael R., Flanagan, Adrienne M., Campbell, Peter J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5490007/
https://www.ncbi.nlm.nih.gov/pubmed/28643781
http://dx.doi.org/10.1038/ncomms15936
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author Behjati, Sam
Tarpey, Patrick S.
Haase, Kerstin
Ye, Hongtao
Young, Matthew D.
Alexandrov, Ludmil B.
Farndon, Sarah J.
Collord, Grace
Wedge, David C.
Martincorena, Inigo
Cooke, Susanna L.
Davies, Helen
Mifsud, William
Lidgren, Mathias
Martin, Sancha
Latimer, Calli
Maddison, Mark
Butler, Adam P.
Teague, Jon W.
Pillay, Nischalan
Shlien, Adam
McDermott, Ultan
Futreal, P. Andrew
Baumhoer, Daniel
Zaikova, Olga
Bjerkehagen, Bodil
Myklebost, Ola
Amary, M. Fernanda
Tirabosco, Roberto
Van Loo, Peter
Stratton, Michael R.
Flanagan, Adrienne M.
Campbell, Peter J.
author_facet Behjati, Sam
Tarpey, Patrick S.
Haase, Kerstin
Ye, Hongtao
Young, Matthew D.
Alexandrov, Ludmil B.
Farndon, Sarah J.
Collord, Grace
Wedge, David C.
Martincorena, Inigo
Cooke, Susanna L.
Davies, Helen
Mifsud, William
Lidgren, Mathias
Martin, Sancha
Latimer, Calli
Maddison, Mark
Butler, Adam P.
Teague, Jon W.
Pillay, Nischalan
Shlien, Adam
McDermott, Ultan
Futreal, P. Andrew
Baumhoer, Daniel
Zaikova, Olga
Bjerkehagen, Bodil
Myklebost, Ola
Amary, M. Fernanda
Tirabosco, Roberto
Van Loo, Peter
Stratton, Michael R.
Flanagan, Adrienne M.
Campbell, Peter J.
author_sort Behjati, Sam
collection PubMed
description Osteosarcoma is a primary malignancy of bone that affects children and adults. Here, we present the largest sequencing study of osteosarcoma to date, comprising 112 childhood and adult tumours encompassing all major histological subtypes. A key finding of our study is the identification of mutations in insulin-like growth factor (IGF) signalling genes in 8/112 (7%) of cases. We validate this observation using fluorescence in situ hybridization (FISH) in an additional 87 osteosarcomas, with IGF1 receptor (IGF1R) amplification observed in 14% of tumours. These findings may inform patient selection in future trials of IGF1R inhibitors in osteosarcoma. Analysing patterns of mutation, we identify distinct rearrangement profiles including a process characterized by chromothripsis and amplification. This process operates recurrently at discrete genomic regions and generates driver mutations. It may represent an age-independent mutational mechanism that contributes to the development of osteosarcoma in children and adults alike.
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spelling pubmed-54900072017-07-06 Recurrent mutation of IGF signalling genes and distinct patterns of genomic rearrangement in osteosarcoma Behjati, Sam Tarpey, Patrick S. Haase, Kerstin Ye, Hongtao Young, Matthew D. Alexandrov, Ludmil B. Farndon, Sarah J. Collord, Grace Wedge, David C. Martincorena, Inigo Cooke, Susanna L. Davies, Helen Mifsud, William Lidgren, Mathias Martin, Sancha Latimer, Calli Maddison, Mark Butler, Adam P. Teague, Jon W. Pillay, Nischalan Shlien, Adam McDermott, Ultan Futreal, P. Andrew Baumhoer, Daniel Zaikova, Olga Bjerkehagen, Bodil Myklebost, Ola Amary, M. Fernanda Tirabosco, Roberto Van Loo, Peter Stratton, Michael R. Flanagan, Adrienne M. Campbell, Peter J. Nat Commun Article Osteosarcoma is a primary malignancy of bone that affects children and adults. Here, we present the largest sequencing study of osteosarcoma to date, comprising 112 childhood and adult tumours encompassing all major histological subtypes. A key finding of our study is the identification of mutations in insulin-like growth factor (IGF) signalling genes in 8/112 (7%) of cases. We validate this observation using fluorescence in situ hybridization (FISH) in an additional 87 osteosarcomas, with IGF1 receptor (IGF1R) amplification observed in 14% of tumours. These findings may inform patient selection in future trials of IGF1R inhibitors in osteosarcoma. Analysing patterns of mutation, we identify distinct rearrangement profiles including a process characterized by chromothripsis and amplification. This process operates recurrently at discrete genomic regions and generates driver mutations. It may represent an age-independent mutational mechanism that contributes to the development of osteosarcoma in children and adults alike. Nature Publishing Group 2017-06-23 /pmc/articles/PMC5490007/ /pubmed/28643781 http://dx.doi.org/10.1038/ncomms15936 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0/ Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Behjati, Sam
Tarpey, Patrick S.
Haase, Kerstin
Ye, Hongtao
Young, Matthew D.
Alexandrov, Ludmil B.
Farndon, Sarah J.
Collord, Grace
Wedge, David C.
Martincorena, Inigo
Cooke, Susanna L.
Davies, Helen
Mifsud, William
Lidgren, Mathias
Martin, Sancha
Latimer, Calli
Maddison, Mark
Butler, Adam P.
Teague, Jon W.
Pillay, Nischalan
Shlien, Adam
McDermott, Ultan
Futreal, P. Andrew
Baumhoer, Daniel
Zaikova, Olga
Bjerkehagen, Bodil
Myklebost, Ola
Amary, M. Fernanda
Tirabosco, Roberto
Van Loo, Peter
Stratton, Michael R.
Flanagan, Adrienne M.
Campbell, Peter J.
Recurrent mutation of IGF signalling genes and distinct patterns of genomic rearrangement in osteosarcoma
title Recurrent mutation of IGF signalling genes and distinct patterns of genomic rearrangement in osteosarcoma
title_full Recurrent mutation of IGF signalling genes and distinct patterns of genomic rearrangement in osteosarcoma
title_fullStr Recurrent mutation of IGF signalling genes and distinct patterns of genomic rearrangement in osteosarcoma
title_full_unstemmed Recurrent mutation of IGF signalling genes and distinct patterns of genomic rearrangement in osteosarcoma
title_short Recurrent mutation of IGF signalling genes and distinct patterns of genomic rearrangement in osteosarcoma
title_sort recurrent mutation of igf signalling genes and distinct patterns of genomic rearrangement in osteosarcoma
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5490007/
https://www.ncbi.nlm.nih.gov/pubmed/28643781
http://dx.doi.org/10.1038/ncomms15936
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