Cargando…
SubVis: an interactive R package for exploring the effects of multiple substitution matrices on pairwise sequence alignment
Understanding how proteins mutate is critical to solving a host of biological problems. Mutations occur when an amino acid is substituted for another in a protein sequence. The set of likelihoods for amino acid substitutions is stored in a matrix and input to alignment algorithms. The quality of the...
Autores principales: | Barlowe, Scott, Coan, Heather B., Youker, Robert T. |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5490468/ https://www.ncbi.nlm.nih.gov/pubmed/28674656 http://dx.doi.org/10.7717/peerj.3492 |
Ejemplares similares
-
New alignment method for remote protein sequences by the direct use of pairwise sequence correlations and substitutions
por: Jia, Kejue, et al.
Publicado: (2023) -
LINflow: a computational pipeline that combines an alignment-free with an alignment-based method to accelerate generation of similarity matrices for prokaryotic genomes
por: Tian, Long, et al.
Publicado: (2021) -
covid19.Explorer: a web application and R package to explore United States COVID-19 data
por: Revell, Liam J.
Publicado: (2021) -
SCelVis: exploratory single cell data analysis on the desktop and in the cloud
por: Obermayer, Benedikt, et al.
Publicado: (2020) -
Inference of differentially expressed genes using generalized linear mixed models in a pairwise fashion
por: Terra Machado, Douglas, et al.
Publicado: (2023)