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A new example of viral intein in Mimivirus

BACKGROUND: Inteins are "protein introns" that remove themselves from their host proteins through an autocatalytic protein-splicing. After their discovery, inteins have been quickly identified in all domains of life, but only once to date in the genome of a eukaryote-infecting virus. RESUL...

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Detalles Bibliográficos
Autores principales: Ogata, Hiroyuki, Raoult, Didier, Claverie, Jean-Michel
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2005
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC549080/
https://www.ncbi.nlm.nih.gov/pubmed/15707490
http://dx.doi.org/10.1186/1743-422X-2-8
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author Ogata, Hiroyuki
Raoult, Didier
Claverie, Jean-Michel
author_facet Ogata, Hiroyuki
Raoult, Didier
Claverie, Jean-Michel
author_sort Ogata, Hiroyuki
collection PubMed
description BACKGROUND: Inteins are "protein introns" that remove themselves from their host proteins through an autocatalytic protein-splicing. After their discovery, inteins have been quickly identified in all domains of life, but only once to date in the genome of a eukaryote-infecting virus. RESULTS: Here we report the identification and bioinformatics characterization of an intein in the DNA polymerase PolB gene of amoeba infecting Mimivirus, the largest known double-stranded DNA virus, the origin of which has been proposed to predate the emergence of eukaryotes. Mimivirus intein exhibits canonical sequence motifs and clearly belongs to a subclass of archaeal inteins always found in the same location of PolB genes. On the other hand, the Mimivirus PolB is most similar to eukaryotic Polδ sequences. CONCLUSIONS: The intriguing association of an extremophilic archaeal-type intein with a mesophilic eukaryotic-like PolB in Mimivirus is consistent with the hypothesis that DNA viruses might have been the central reservoir of inteins throughout the course of evolution.
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spelling pubmed-5490802005-02-19 A new example of viral intein in Mimivirus Ogata, Hiroyuki Raoult, Didier Claverie, Jean-Michel Virol J Research BACKGROUND: Inteins are "protein introns" that remove themselves from their host proteins through an autocatalytic protein-splicing. After their discovery, inteins have been quickly identified in all domains of life, but only once to date in the genome of a eukaryote-infecting virus. RESULTS: Here we report the identification and bioinformatics characterization of an intein in the DNA polymerase PolB gene of amoeba infecting Mimivirus, the largest known double-stranded DNA virus, the origin of which has been proposed to predate the emergence of eukaryotes. Mimivirus intein exhibits canonical sequence motifs and clearly belongs to a subclass of archaeal inteins always found in the same location of PolB genes. On the other hand, the Mimivirus PolB is most similar to eukaryotic Polδ sequences. CONCLUSIONS: The intriguing association of an extremophilic archaeal-type intein with a mesophilic eukaryotic-like PolB in Mimivirus is consistent with the hypothesis that DNA viruses might have been the central reservoir of inteins throughout the course of evolution. BioMed Central 2005-02-11 /pmc/articles/PMC549080/ /pubmed/15707490 http://dx.doi.org/10.1186/1743-422X-2-8 Text en Copyright © 2005 Ogata et al; licensee BioMed Central Ltd. http://creativecommons.org/licenses/by/2.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( (http://creativecommons.org/licenses/by/2.0) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research
Ogata, Hiroyuki
Raoult, Didier
Claverie, Jean-Michel
A new example of viral intein in Mimivirus
title A new example of viral intein in Mimivirus
title_full A new example of viral intein in Mimivirus
title_fullStr A new example of viral intein in Mimivirus
title_full_unstemmed A new example of viral intein in Mimivirus
title_short A new example of viral intein in Mimivirus
title_sort new example of viral intein in mimivirus
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC549080/
https://www.ncbi.nlm.nih.gov/pubmed/15707490
http://dx.doi.org/10.1186/1743-422X-2-8
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