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Tuning the transcription and translation of L-amino acid deaminase in Escherichia coli improves α-ketoisocaproate production from L-leucine
α-Ketoisocaproate (KIC) is used widely in the pharmaceutical and nutraceutical industries. In previous studies, we achieved a one-step biosynthesis of KIC from l-leucine, using an Escherichia coli whole-cell biocatalyst expressing an l-amino acid deaminase (l-AAD) from Proteus vulgaris. Herein, we r...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5491005/ https://www.ncbi.nlm.nih.gov/pubmed/28662040 http://dx.doi.org/10.1371/journal.pone.0179229 |
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author | Song, Yang Li, Jianghua Shin, Hyun-dong Liu, Long Du, Guocheng Chen, Jian |
author_facet | Song, Yang Li, Jianghua Shin, Hyun-dong Liu, Long Du, Guocheng Chen, Jian |
author_sort | Song, Yang |
collection | PubMed |
description | α-Ketoisocaproate (KIC) is used widely in the pharmaceutical and nutraceutical industries. In previous studies, we achieved a one-step biosynthesis of KIC from l-leucine, using an Escherichia coli whole-cell biocatalyst expressing an l-amino acid deaminase (l-AAD) from Proteus vulgaris. Herein, we report the fine-tuning of l-AAD gene expression in E. coli BL21 (DE3) at the transcriptional and translational levels to improve the KIC titer. By optimizing the plasmid origin with different copy numbers, modulating messenger RNA structure downstream of the initiation codon, and designing the sequences at the ribosome binding site, we increased biocatalyst activity to 31.77%, 24.89%, and 30.20%, respectively, above that achieved with BL21/pet28a-lad. The highest KIC titers reached 76.47 g·L(-1), 80.29 g·L(-1), and 81.41 g·L(-1), respectively. Additionally, the integration of these three engineering strategies achieved an even higher KIC production of 86.55 g·L(-1) and a higher l-leucine conversion rate of 94.25%. The enzyme-engineering strategies proposed herein may be generally applicable to the construction of other biocatalysts. |
format | Online Article Text |
id | pubmed-5491005 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-54910052017-07-18 Tuning the transcription and translation of L-amino acid deaminase in Escherichia coli improves α-ketoisocaproate production from L-leucine Song, Yang Li, Jianghua Shin, Hyun-dong Liu, Long Du, Guocheng Chen, Jian PLoS One Research Article α-Ketoisocaproate (KIC) is used widely in the pharmaceutical and nutraceutical industries. In previous studies, we achieved a one-step biosynthesis of KIC from l-leucine, using an Escherichia coli whole-cell biocatalyst expressing an l-amino acid deaminase (l-AAD) from Proteus vulgaris. Herein, we report the fine-tuning of l-AAD gene expression in E. coli BL21 (DE3) at the transcriptional and translational levels to improve the KIC titer. By optimizing the plasmid origin with different copy numbers, modulating messenger RNA structure downstream of the initiation codon, and designing the sequences at the ribosome binding site, we increased biocatalyst activity to 31.77%, 24.89%, and 30.20%, respectively, above that achieved with BL21/pet28a-lad. The highest KIC titers reached 76.47 g·L(-1), 80.29 g·L(-1), and 81.41 g·L(-1), respectively. Additionally, the integration of these three engineering strategies achieved an even higher KIC production of 86.55 g·L(-1) and a higher l-leucine conversion rate of 94.25%. The enzyme-engineering strategies proposed herein may be generally applicable to the construction of other biocatalysts. Public Library of Science 2017-06-29 /pmc/articles/PMC5491005/ /pubmed/28662040 http://dx.doi.org/10.1371/journal.pone.0179229 Text en © 2017 Song et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Song, Yang Li, Jianghua Shin, Hyun-dong Liu, Long Du, Guocheng Chen, Jian Tuning the transcription and translation of L-amino acid deaminase in Escherichia coli improves α-ketoisocaproate production from L-leucine |
title | Tuning the transcription and translation of L-amino acid deaminase in Escherichia coli improves α-ketoisocaproate production from L-leucine |
title_full | Tuning the transcription and translation of L-amino acid deaminase in Escherichia coli improves α-ketoisocaproate production from L-leucine |
title_fullStr | Tuning the transcription and translation of L-amino acid deaminase in Escherichia coli improves α-ketoisocaproate production from L-leucine |
title_full_unstemmed | Tuning the transcription and translation of L-amino acid deaminase in Escherichia coli improves α-ketoisocaproate production from L-leucine |
title_short | Tuning the transcription and translation of L-amino acid deaminase in Escherichia coli improves α-ketoisocaproate production from L-leucine |
title_sort | tuning the transcription and translation of l-amino acid deaminase in escherichia coli improves α-ketoisocaproate production from l-leucine |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5491005/ https://www.ncbi.nlm.nih.gov/pubmed/28662040 http://dx.doi.org/10.1371/journal.pone.0179229 |
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