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Use of mRNA- and protein-destabilizing elements to develop a highly responsive reporter system
Reporter assays are widely used in applications that require measurement of changes in gene expression over time (e.g. drug screening). With standard reporter vectors, the measurable effect of a treatment or compound (altered reporter activity) is substantially diluted and delayed, compared with its...
Autores principales: | , , , , , , , , |
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Formato: | Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2005
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC549429/ https://www.ncbi.nlm.nih.gov/pubmed/15716309 http://dx.doi.org/10.1093/nar/gni030 |
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author | Voon, Dominic C. Subrata, Lily S. Baltic, Svetlana Leu, Marco P. Whiteway, Joanna M. Wong, Agnes Knight, Samuel A. Christiansen, Frank T. Daly, John M. |
author_facet | Voon, Dominic C. Subrata, Lily S. Baltic, Svetlana Leu, Marco P. Whiteway, Joanna M. Wong, Agnes Knight, Samuel A. Christiansen, Frank T. Daly, John M. |
author_sort | Voon, Dominic C. |
collection | PubMed |
description | Reporter assays are widely used in applications that require measurement of changes in gene expression over time (e.g. drug screening). With standard reporter vectors, the measurable effect of a treatment or compound (altered reporter activity) is substantially diluted and delayed, compared with its true effect (altered transcriptional activity). This problem is caused by the relatively long half-lives of both the reporter protein and its mRNA. As a result, the activities of compounds, ligands or treatments that have a relatively minor effect, or a substantial but transient effect, often remain undetected. To circumvent this problem, we introduced modular protein- and mRNA-destabilizing elements into a range of commonly used reporters. Our data show that both elements are required for maximal responses to both increases and decreases in transcriptional activity. The double-destabilized reporter vectors showed markedly improved performance in drug screening, kinetic assays and dose–response titrations. |
format | Text |
id | pubmed-549429 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2005 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-5494292005-02-24 Use of mRNA- and protein-destabilizing elements to develop a highly responsive reporter system Voon, Dominic C. Subrata, Lily S. Baltic, Svetlana Leu, Marco P. Whiteway, Joanna M. Wong, Agnes Knight, Samuel A. Christiansen, Frank T. Daly, John M. Nucleic Acids Res Methods Online Reporter assays are widely used in applications that require measurement of changes in gene expression over time (e.g. drug screening). With standard reporter vectors, the measurable effect of a treatment or compound (altered reporter activity) is substantially diluted and delayed, compared with its true effect (altered transcriptional activity). This problem is caused by the relatively long half-lives of both the reporter protein and its mRNA. As a result, the activities of compounds, ligands or treatments that have a relatively minor effect, or a substantial but transient effect, often remain undetected. To circumvent this problem, we introduced modular protein- and mRNA-destabilizing elements into a range of commonly used reporters. Our data show that both elements are required for maximal responses to both increases and decreases in transcriptional activity. The double-destabilized reporter vectors showed markedly improved performance in drug screening, kinetic assays and dose–response titrations. Oxford University Press 2005 2005-02-16 /pmc/articles/PMC549429/ /pubmed/15716309 http://dx.doi.org/10.1093/nar/gni030 Text en © The Author 2005. Published by Oxford University Press. All rights reserved |
spellingShingle | Methods Online Voon, Dominic C. Subrata, Lily S. Baltic, Svetlana Leu, Marco P. Whiteway, Joanna M. Wong, Agnes Knight, Samuel A. Christiansen, Frank T. Daly, John M. Use of mRNA- and protein-destabilizing elements to develop a highly responsive reporter system |
title | Use of mRNA- and protein-destabilizing elements to develop a highly responsive reporter system |
title_full | Use of mRNA- and protein-destabilizing elements to develop a highly responsive reporter system |
title_fullStr | Use of mRNA- and protein-destabilizing elements to develop a highly responsive reporter system |
title_full_unstemmed | Use of mRNA- and protein-destabilizing elements to develop a highly responsive reporter system |
title_short | Use of mRNA- and protein-destabilizing elements to develop a highly responsive reporter system |
title_sort | use of mrna- and protein-destabilizing elements to develop a highly responsive reporter system |
topic | Methods Online |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC549429/ https://www.ncbi.nlm.nih.gov/pubmed/15716309 http://dx.doi.org/10.1093/nar/gni030 |
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