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Functional modulation and directed assembly of an enzyme through designed non-natural post-translation modification

Post-translational modification (PTM) modulates and supplements protein functionality. In nature this high precision event requires specific motifs and/or associated modification machinery. To overcome the inherent complexity that hinders PTM's wider use, we have utilized a non-native biocompat...

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Autores principales: Hartley, Andrew M., Zaki, Athraa J., McGarrity, Adam R., Robert-Ansart, Cecile, Moskalenko, Andriy V., Jones, Gareth F., Craciun, Monica F., Russo, Saverio, Elliott, Martin, Macdonald, J. Emyr, Jones, D. Dafydd
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Royal Society of Chemistry 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5496188/
https://www.ncbi.nlm.nih.gov/pubmed/28706718
http://dx.doi.org/10.1039/c4sc03900a
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author Hartley, Andrew M.
Zaki, Athraa J.
McGarrity, Adam R.
Robert-Ansart, Cecile
Moskalenko, Andriy V.
Jones, Gareth F.
Craciun, Monica F.
Russo, Saverio
Elliott, Martin
Macdonald, J. Emyr
Jones, D. Dafydd
author_facet Hartley, Andrew M.
Zaki, Athraa J.
McGarrity, Adam R.
Robert-Ansart, Cecile
Moskalenko, Andriy V.
Jones, Gareth F.
Craciun, Monica F.
Russo, Saverio
Elliott, Martin
Macdonald, J. Emyr
Jones, D. Dafydd
author_sort Hartley, Andrew M.
collection PubMed
description Post-translational modification (PTM) modulates and supplements protein functionality. In nature this high precision event requires specific motifs and/or associated modification machinery. To overcome the inherent complexity that hinders PTM's wider use, we have utilized a non-native biocompatible Click chemistry approach to site-specifically modify TEM β-lactamase that adds new functionality. In silico modelling was used to design TEM β-lactamase variants with the non-natural amino acid p-azido-l-phenylalanine (azF) placed at functionally strategic positions permitting residue-specific modification with alkyne adducts by exploiting strain-promoted azide–alkyne cycloaddition. Three designs were implemented so that the modification would: (i) inhibit TEM activity (Y105azF); (ii) restore activity compromised by the initial mutation (P174azF); (iii) facilitate assembly on pristine graphene (W165azF). A dibenzylcyclooctyne (DBCO) with amine functionality was enough to modulate enzymatic activity. Modification of TEM(W165azF) with a DBCO–pyrene adduct had little effect on activity despite the modification site being close to a key catalytic residue but allowed directed assembly of the enzyme on graphene, potentially facilitating the construction of protein-gated carbon transistor systems.
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spelling pubmed-54961882017-07-13 Functional modulation and directed assembly of an enzyme through designed non-natural post-translation modification Hartley, Andrew M. Zaki, Athraa J. McGarrity, Adam R. Robert-Ansart, Cecile Moskalenko, Andriy V. Jones, Gareth F. Craciun, Monica F. Russo, Saverio Elliott, Martin Macdonald, J. Emyr Jones, D. Dafydd Chem Sci Chemistry Post-translational modification (PTM) modulates and supplements protein functionality. In nature this high precision event requires specific motifs and/or associated modification machinery. To overcome the inherent complexity that hinders PTM's wider use, we have utilized a non-native biocompatible Click chemistry approach to site-specifically modify TEM β-lactamase that adds new functionality. In silico modelling was used to design TEM β-lactamase variants with the non-natural amino acid p-azido-l-phenylalanine (azF) placed at functionally strategic positions permitting residue-specific modification with alkyne adducts by exploiting strain-promoted azide–alkyne cycloaddition. Three designs were implemented so that the modification would: (i) inhibit TEM activity (Y105azF); (ii) restore activity compromised by the initial mutation (P174azF); (iii) facilitate assembly on pristine graphene (W165azF). A dibenzylcyclooctyne (DBCO) with amine functionality was enough to modulate enzymatic activity. Modification of TEM(W165azF) with a DBCO–pyrene adduct had little effect on activity despite the modification site being close to a key catalytic residue but allowed directed assembly of the enzyme on graphene, potentially facilitating the construction of protein-gated carbon transistor systems. Royal Society of Chemistry 2015-07-01 2015-03-31 /pmc/articles/PMC5496188/ /pubmed/28706718 http://dx.doi.org/10.1039/c4sc03900a Text en This journal is © The Royal Society of Chemistry 2015 https://creativecommons.org/licenses/by/3.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution 3.0 Unported License (http://creativecommons.org/licenses/by/3.0/ (https://creativecommons.org/licenses/by/3.0/) ) which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Chemistry
Hartley, Andrew M.
Zaki, Athraa J.
McGarrity, Adam R.
Robert-Ansart, Cecile
Moskalenko, Andriy V.
Jones, Gareth F.
Craciun, Monica F.
Russo, Saverio
Elliott, Martin
Macdonald, J. Emyr
Jones, D. Dafydd
Functional modulation and directed assembly of an enzyme through designed non-natural post-translation modification
title Functional modulation and directed assembly of an enzyme through designed non-natural post-translation modification
title_full Functional modulation and directed assembly of an enzyme through designed non-natural post-translation modification
title_fullStr Functional modulation and directed assembly of an enzyme through designed non-natural post-translation modification
title_full_unstemmed Functional modulation and directed assembly of an enzyme through designed non-natural post-translation modification
title_short Functional modulation and directed assembly of an enzyme through designed non-natural post-translation modification
title_sort functional modulation and directed assembly of an enzyme through designed non-natural post-translation modification
topic Chemistry
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5496188/
https://www.ncbi.nlm.nih.gov/pubmed/28706718
http://dx.doi.org/10.1039/c4sc03900a
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