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Sample size and classification error for Bayesian change-point models with unlabelled sub-groups and incomplete follow-up

Many medical (and ecological) processes involve the change of shape, whereby one trajectory changes into another trajectory at a specific time point. There has been little investigation into the study design needed to investigate these models. We consider the class of fixed effect change-point model...

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Autores principales: White, Simon R, Muniz-Terrera, Graciela, Matthews, Fiona E
Formato: Online Artículo Texto
Lenguaje:English
Publicado: SAGE Publications 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5496674/
https://www.ncbi.nlm.nih.gov/pubmed/27507286
http://dx.doi.org/10.1177/0962280216662298
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author White, Simon R
Muniz-Terrera, Graciela
Matthews, Fiona E
author_facet White, Simon R
Muniz-Terrera, Graciela
Matthews, Fiona E
author_sort White, Simon R
collection PubMed
description Many medical (and ecological) processes involve the change of shape, whereby one trajectory changes into another trajectory at a specific time point. There has been little investigation into the study design needed to investigate these models. We consider the class of fixed effect change-point models with an underlying shape comprised two joined linear segments, also known as broken-stick models. We extend this model to include two sub-groups with different trajectories at the change-point, a change and no change class, and also include a missingness model to account for individuals with incomplete follow-up. Through a simulation study, we consider the relationship of sample size to the estimates of the underlying shape, the existence of a change-point, and the classification-error of sub-group labels. We use a Bayesian framework to account for the missing labels, and the analysis of each simulation is performed using standard Markov chain Monte Carlo techniques. Our simulation study is inspired by cognitive decline as measured by the Mini-Mental State Examination, where our extended model is appropriate due to the commonly observed mixture of individuals within studies who do or do not exhibit accelerated decline. We find that even for studies of modest size (n = 500, with 50 individuals observed past the change-point) in the fixed effect setting, a change-point can be detected and reliably estimated across a range of observation-errors.
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spelling pubmed-54966742018-04-04 Sample size and classification error for Bayesian change-point models with unlabelled sub-groups and incomplete follow-up White, Simon R Muniz-Terrera, Graciela Matthews, Fiona E Stat Methods Med Res Articles Many medical (and ecological) processes involve the change of shape, whereby one trajectory changes into another trajectory at a specific time point. There has been little investigation into the study design needed to investigate these models. We consider the class of fixed effect change-point models with an underlying shape comprised two joined linear segments, also known as broken-stick models. We extend this model to include two sub-groups with different trajectories at the change-point, a change and no change class, and also include a missingness model to account for individuals with incomplete follow-up. Through a simulation study, we consider the relationship of sample size to the estimates of the underlying shape, the existence of a change-point, and the classification-error of sub-group labels. We use a Bayesian framework to account for the missing labels, and the analysis of each simulation is performed using standard Markov chain Monte Carlo techniques. Our simulation study is inspired by cognitive decline as measured by the Mini-Mental State Examination, where our extended model is appropriate due to the commonly observed mixture of individuals within studies who do or do not exhibit accelerated decline. We find that even for studies of modest size (n = 500, with 50 individuals observed past the change-point) in the fixed effect setting, a change-point can be detected and reliably estimated across a range of observation-errors. SAGE Publications 2016-08-08 2018-05 /pmc/articles/PMC5496674/ /pubmed/27507286 http://dx.doi.org/10.1177/0962280216662298 Text en © The Author(s) 2016 http://creativecommons.org/licenses/by/3.0/ This article is distributed under the terms of the Creative Commons Attribution 3.0 License (http://www.creativecommons.org/licenses/by/3.0/) which permits any use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage).
spellingShingle Articles
White, Simon R
Muniz-Terrera, Graciela
Matthews, Fiona E
Sample size and classification error for Bayesian change-point models with unlabelled sub-groups and incomplete follow-up
title Sample size and classification error for Bayesian change-point models with unlabelled sub-groups and incomplete follow-up
title_full Sample size and classification error for Bayesian change-point models with unlabelled sub-groups and incomplete follow-up
title_fullStr Sample size and classification error for Bayesian change-point models with unlabelled sub-groups and incomplete follow-up
title_full_unstemmed Sample size and classification error for Bayesian change-point models with unlabelled sub-groups and incomplete follow-up
title_short Sample size and classification error for Bayesian change-point models with unlabelled sub-groups and incomplete follow-up
title_sort sample size and classification error for bayesian change-point models with unlabelled sub-groups and incomplete follow-up
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5496674/
https://www.ncbi.nlm.nih.gov/pubmed/27507286
http://dx.doi.org/10.1177/0962280216662298
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