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Benchmarking: contexts and details matter

Benchmarking is an essential step in the development of computational tools. We take this opportunity to pitch in our opinions on tool benchmarking, in light of two correspondence articles published in Genome Biology. Please see related Li et al. and Newman et al. correspondence articles: www.dx.doi...

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Detalles Bibliográficos
Autor principal: Zheng, Siyuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5499005/
https://www.ncbi.nlm.nih.gov/pubmed/28679434
http://dx.doi.org/10.1186/s13059-017-1258-3
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author Zheng, Siyuan
author_facet Zheng, Siyuan
author_sort Zheng, Siyuan
collection PubMed
description Benchmarking is an essential step in the development of computational tools. We take this opportunity to pitch in our opinions on tool benchmarking, in light of two correspondence articles published in Genome Biology. Please see related Li et al. and Newman et al. correspondence articles: www.dx.doi.org/10.1186/s13059-017-1256-5 and www.dx.doi.org/10.1186/s13059-017-1257-4
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spelling pubmed-54990052017-07-10 Benchmarking: contexts and details matter Zheng, Siyuan Genome Biol Correspondence Benchmarking is an essential step in the development of computational tools. We take this opportunity to pitch in our opinions on tool benchmarking, in light of two correspondence articles published in Genome Biology. Please see related Li et al. and Newman et al. correspondence articles: www.dx.doi.org/10.1186/s13059-017-1256-5 and www.dx.doi.org/10.1186/s13059-017-1257-4 BioMed Central 2017-07-05 /pmc/articles/PMC5499005/ /pubmed/28679434 http://dx.doi.org/10.1186/s13059-017-1258-3 Text en © The Author(s). 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Correspondence
Zheng, Siyuan
Benchmarking: contexts and details matter
title Benchmarking: contexts and details matter
title_full Benchmarking: contexts and details matter
title_fullStr Benchmarking: contexts and details matter
title_full_unstemmed Benchmarking: contexts and details matter
title_short Benchmarking: contexts and details matter
title_sort benchmarking: contexts and details matter
topic Correspondence
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5499005/
https://www.ncbi.nlm.nih.gov/pubmed/28679434
http://dx.doi.org/10.1186/s13059-017-1258-3
work_keys_str_mv AT zhengsiyuan benchmarkingcontextsanddetailsmatter