Cargando…

Newly characterized interaction stabilizes DNA structure: oligoethylene glycols stabilize G-quadruplexes CH–π interactions

Oligoethylene glycols are used as crowding agents in experiments that aim to understand the effects of intracellular environments on DNAs. Moreover, DNAs with covalently attached oligoethylene glycols are used as cargo carriers for drug delivery systems. To investigate how oligoethylene glycols inte...

Descripción completa

Detalles Bibliográficos
Autores principales:	Tateishi-Karimata, Hisae, Ohyama, Tatsuya, Muraoka, Takahiro, Podbevsek, Peter, Wawro, Adam M., Tanaka, Shigenori, Nakano, Shu-ichi, Kinbara, Kazushi, Plavec, Janez, Sugimoto, Naoki
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2017
Materias:	Chemical Biology and Nucleic Acid Chemistry
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5499538/ https://www.ncbi.nlm.nih.gov/pubmed/28453855 http://dx.doi.org/10.1093/nar/gkx299

Ejemplares similares

New Modified Deoxythymine with Dibranched Tetraethylene Glycol Stabilizes G-Quadruplex Structures
por: Tateishi-Karimata, Hisae, et al.
Publicado: (2020)

Thrombin binding aptamer G-quadruplex stabilized by pyrene-modified nucleotides
por: Kovačič, Matic, et al.
Publicado: (2020)

Pursuing origins of (poly)ethylene glycol-induced G-quadruplex structural modulations
por: Trajkovski, Marko, et al.
Publicado: (2018)

Nearest-neighbor parameters for the prediction of RNA duplex stability in diverse in vitro and cellular-like crowding conditions
por: Ghosh, Saptarshi, et al.
Publicado: (2023)

Oxidative lesions modulate G-quadruplex stability and structure in the human BCL2 promoter
por: Bielskutė, Stasė, et al.
Publicado: (2021)

Coulomb and CH–π interactions in (6–4) photolyase–DNA complex dominate DNA binding and repair abilities
por: Terai, Yuma, et al.
Publicado: (2018)

Thermodynamic properties of water molecules in the presence of cosolute depend on DNA structure: a study using grid inhomogeneous solvation theory
por: Nakano, Miki, et al.
Publicado: (2015)

Transcriptome screening followed by integrated physicochemical and structural analyses for investigating RNA-mediated berberine activity
por: Satpathi, Sagar, et al.
Publicado: (2021)

c-kit2 G-quadruplex stabilized via a covalent probe: exploring G-quartet asymmetry
por: Peterková, Kateřina, et al.
Publicado: (2021)

Validation of the nearest-neighbor model for Watson–Crick self-complementary DNA duplexes in molecular crowding condition
por: Ghosh, Saptarshi, et al.
Publicado: (2019)

Loop permutation affects the topology and stability of G-quadruplexes
por: Cheng, Mingpan, et al.
Publicado: (2018)

Effect of Potassium Concentration on Triplex Stability under Molecular Crowding Conditions
por: Teng, Ye, et al.
Publicado: (2020)

Impact of Oxidative Lesions on the Human Telomeric G-Quadruplex
por: Bielskutė, Stasė, et al.
Publicado: (2019)

KRAS promoter oligonucleotide with decoy activity dimerizes into a unique topology consisting of two G-quadruplex units
por: Podbevšek, Peter, et al.
Publicado: (2016)

Structure, stability and behaviour of nucleic acids in ionic liquids
por: Tateishi-Karimata, Hisae, et al.
Publicado: (2014)

Clustered abasic lesions profoundly change the structure and stability of human telomeric G-quadruplexes
por: Kejnovská, Iva, et al.
Publicado: (2017)

NMR evaluation of ammonium ion movement within a unimolecular G-quadruplex in solution
por: Podbevšek, Peter, et al.
Publicado: (2007)

Organelle-mimicking liposome dissociates G-quadruplexes and facilitates transcription
por: Pramanik, Smritimoy, et al.
Publicado: (2014)

Human replication protein A unfolds telomeric G-quadruplexes
por: Salas, Tonatiuh Romero, et al.
Publicado: (2006)

Human DDX21 binds and unwinds RNA guanine quadruplexes
por: McRae, Ewan K.S., et al.
Publicado: (2017)

G-Quadruplex loops regulate PARP-1 enzymatic activation
por: Edwards, Andrea D, et al.
Publicado: (2020)

G-quadruplex inducer/stabilizer pyridostatin targets SUB1 to promote cytotoxicity of a transplatinum complex
por: Hou, Yinzhu, et al.
Publicado: (2022)

Intrinsic stability and oligomerization dynamics of DNA processivity clamps
por: Binder, Jennifer K., et al.
Publicado: (2014)

Insights into the mechanism of a G-quadruplex-unwinding DEAH-box helicase
por: Chen, Michael C., et al.
Publicado: (2015)

Active site closure stabilizes the backtracked state of RNA polymerase
por: Turtola, Matti, et al.
Publicado: (2018)

BLM unfolds G-quadruplexes in different structural environments through different mechanisms
por: Wu, Wen-Qiang, et al.
Publicado: (2015)

Zippered G-quadruplex/hemin DNAzyme: exceptional catalyst for universal bioanalytical applications
por: Li, Jia, et al.
Publicado: (2021)

Probing the stability of the SpCas9–DNA complex after cleavage
por: Aldag, Pierre, et al.
Publicado: (2021)

Specific suppression of D-RNA G-quadruplex–protein interaction with an L-RNA aptamer
por: Umar, Mubarak I, et al.
Publicado: (2020)

Heme activation by DNA: isoguanine pentaplexes, but not quadruplexes, bind heme and enhance its oxidative activity
por: Shumayrikh, Nisreen, et al.
Publicado: (2015)

Annealing helicase HARP closes RPA-stabilized DNA bubbles non-processively
por: Burnham, Daniel R., et al.
Publicado: (2017)

USP37 regulates DNA damage response through stabilizing and deubiquitinating BLM
por: Wu, Chenming, et al.
Publicado: (2021)

Improved nearest-neighbor parameters for the stability of RNA/DNA hybrids under a physiological condition
por: Banerjee, Dipanwita, et al.
Publicado: (2020)

Mycobacterial RNA polymerase forms unstable open promoter complexes that are stabilized by CarD
por: Davis, Elizabeth, et al.
Publicado: (2015)

DNA polymerase gamma mutations that impair holoenzyme stability cause catalytic subunit depletion
por: Silva-Pinheiro, Pedro, et al.
Publicado: (2021)

Comparable Stability of Hoogsteen and Watson–Crick Base Pairs in Ionic Liquid Choline Dihydrogen Phosphate
por: Tateishi-Karimata, Hisae, et al.
Publicado: (2014)

Structural polymorphism driven by a register shift in a CGAG-rich region found in the promoter of the neurodevelopmental regulator AUTS2 gene
por: Novotný, Aleš, et al.
Publicado: (2023)

Conjugate of Thiol and Guanidyl Units with Oligoethylene Glycol Linkage for Manipulation of Oxidative Protein Folding
por: Okada, Shunsuke, et al.
Publicado: (2021)

Correction to ‘Improved nearest-neighbor parameters for the stability of RNA/DNA hybrids under a physiological condition’
por: Banerjee, Dipanwita, et al.
Publicado: (2021)

Reversible manipulation of the G-quadruplex structures and enzymatic reactions through supramolecular host–guest interactions
por: Tian, Tian, et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_u4sodao2h3a4m0kl9u62mt4i84