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Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer

The capacity of metal-containing porphyrinoids to mediate reductive dehalogenation is implemented in cobamide-containing reductive dehalogenases (RDases), which serve as terminal reductases in organohalide-respiring microbes. RDases allow for the exploitation of halogenated compounds as electron acc...

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Autores principales: Kunze, Cindy, Bommer, Martin, Hagen, Wilfred R., Uksa, Marie, Dobbek, Holger, Schubert, Torsten, Diekert, Gabriele
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5500849/
https://www.ncbi.nlm.nih.gov/pubmed/28671181
http://dx.doi.org/10.1038/ncomms15858
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author Kunze, Cindy
Bommer, Martin
Hagen, Wilfred R.
Uksa, Marie
Dobbek, Holger
Schubert, Torsten
Diekert, Gabriele
author_facet Kunze, Cindy
Bommer, Martin
Hagen, Wilfred R.
Uksa, Marie
Dobbek, Holger
Schubert, Torsten
Diekert, Gabriele
author_sort Kunze, Cindy
collection PubMed
description The capacity of metal-containing porphyrinoids to mediate reductive dehalogenation is implemented in cobamide-containing reductive dehalogenases (RDases), which serve as terminal reductases in organohalide-respiring microbes. RDases allow for the exploitation of halogenated compounds as electron acceptors. Their reaction mechanism is under debate. Here we report on substrate–enzyme interactions in a tetrachloroethene RDase (PceA) that also converts aryl halides. The shape of PceA’s highly apolar active site directs binding of bromophenols at some distance from the cobalt and with the hydroxyl substituent towards the metal. A close cobalt–substrate interaction is not observed by electron paramagnetic resonance spectroscopy. Nonetheless, a halogen substituent para to the hydroxyl group is reductively eliminated and the path of the leaving halide is traced in the structure. Based on these findings, an enzymatic mechanism relying on a long-range electron transfer is concluded, which is without parallel in vitamin B(12)-dependent biochemistry and represents an effective mode of RDase catalysis.
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spelling pubmed-55008492017-07-11 Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer Kunze, Cindy Bommer, Martin Hagen, Wilfred R. Uksa, Marie Dobbek, Holger Schubert, Torsten Diekert, Gabriele Nat Commun Article The capacity of metal-containing porphyrinoids to mediate reductive dehalogenation is implemented in cobamide-containing reductive dehalogenases (RDases), which serve as terminal reductases in organohalide-respiring microbes. RDases allow for the exploitation of halogenated compounds as electron acceptors. Their reaction mechanism is under debate. Here we report on substrate–enzyme interactions in a tetrachloroethene RDase (PceA) that also converts aryl halides. The shape of PceA’s highly apolar active site directs binding of bromophenols at some distance from the cobalt and with the hydroxyl substituent towards the metal. A close cobalt–substrate interaction is not observed by electron paramagnetic resonance spectroscopy. Nonetheless, a halogen substituent para to the hydroxyl group is reductively eliminated and the path of the leaving halide is traced in the structure. Based on these findings, an enzymatic mechanism relying on a long-range electron transfer is concluded, which is without parallel in vitamin B(12)-dependent biochemistry and represents an effective mode of RDase catalysis. Nature Publishing Group 2017-07-03 /pmc/articles/PMC5500849/ /pubmed/28671181 http://dx.doi.org/10.1038/ncomms15858 Text en Copyright © 2017, The Author(s) http://creativecommons.org/licenses/by/4.0/ Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Kunze, Cindy
Bommer, Martin
Hagen, Wilfred R.
Uksa, Marie
Dobbek, Holger
Schubert, Torsten
Diekert, Gabriele
Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer
title Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer
title_full Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer
title_fullStr Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer
title_full_unstemmed Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer
title_short Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer
title_sort cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5500849/
https://www.ncbi.nlm.nih.gov/pubmed/28671181
http://dx.doi.org/10.1038/ncomms15858
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