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Heterogeneous ensembles for predicting survival of metastatic, castrate-resistant prostate cancer patients
Ensemble methods have been successfully applied in a wide range of scenarios, including survival analysis. However, most ensemble models for survival analysis consist of models that all optimize the same loss function and do not fully utilize the diversity in available models. We propose heterogeneo...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
F1000Research
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5500862/ https://www.ncbi.nlm.nih.gov/pubmed/28713544 http://dx.doi.org/10.12688/f1000research.8231.3 |
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author | Pölsterl, Sebastian Gupta, Pankaj Wang, Lichao Conjeti, Sailesh Katouzian, Amin Navab, Nassir |
author_facet | Pölsterl, Sebastian Gupta, Pankaj Wang, Lichao Conjeti, Sailesh Katouzian, Amin Navab, Nassir |
author_sort | Pölsterl, Sebastian |
collection | PubMed |
description | Ensemble methods have been successfully applied in a wide range of scenarios, including survival analysis. However, most ensemble models for survival analysis consist of models that all optimize the same loss function and do not fully utilize the diversity in available models. We propose heterogeneous survival ensembles that combine several survival models, each optimizing a different loss during training. We evaluated our proposed technique in the context of the Prostate Cancer DREAM Challenge, where the objective was to predict survival of patients with metastatic, castrate-resistant prostate cancer from patient records of four phase III clinical trials. Results demonstrate that a diverse set of survival models were preferred over a single model and that our heterogeneous ensemble of survival models outperformed all competing methods with respect to predicting the exact time of death in the Prostate Cancer DREAM Challenge. |
format | Online Article Text |
id | pubmed-5500862 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | F1000Research |
record_format | MEDLINE/PubMed |
spelling | pubmed-55008622017-07-13 Heterogeneous ensembles for predicting survival of metastatic, castrate-resistant prostate cancer patients Pölsterl, Sebastian Gupta, Pankaj Wang, Lichao Conjeti, Sailesh Katouzian, Amin Navab, Nassir F1000Res Method Article Ensemble methods have been successfully applied in a wide range of scenarios, including survival analysis. However, most ensemble models for survival analysis consist of models that all optimize the same loss function and do not fully utilize the diversity in available models. We propose heterogeneous survival ensembles that combine several survival models, each optimizing a different loss during training. We evaluated our proposed technique in the context of the Prostate Cancer DREAM Challenge, where the objective was to predict survival of patients with metastatic, castrate-resistant prostate cancer from patient records of four phase III clinical trials. Results demonstrate that a diverse set of survival models were preferred over a single model and that our heterogeneous ensemble of survival models outperformed all competing methods with respect to predicting the exact time of death in the Prostate Cancer DREAM Challenge. F1000Research 2017-07-06 /pmc/articles/PMC5500862/ /pubmed/28713544 http://dx.doi.org/10.12688/f1000research.8231.3 Text en Copyright: © 2017 Pölsterl S et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Method Article Pölsterl, Sebastian Gupta, Pankaj Wang, Lichao Conjeti, Sailesh Katouzian, Amin Navab, Nassir Heterogeneous ensembles for predicting survival of metastatic, castrate-resistant prostate cancer patients |
title | Heterogeneous ensembles for predicting survival of metastatic, castrate-resistant prostate cancer patients |
title_full | Heterogeneous ensembles for predicting survival of metastatic, castrate-resistant prostate cancer patients |
title_fullStr | Heterogeneous ensembles for predicting survival of metastatic, castrate-resistant prostate cancer patients |
title_full_unstemmed | Heterogeneous ensembles for predicting survival of metastatic, castrate-resistant prostate cancer patients |
title_short | Heterogeneous ensembles for predicting survival of metastatic, castrate-resistant prostate cancer patients |
title_sort | heterogeneous ensembles for predicting survival of metastatic, castrate-resistant prostate cancer patients |
topic | Method Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5500862/ https://www.ncbi.nlm.nih.gov/pubmed/28713544 http://dx.doi.org/10.12688/f1000research.8231.3 |
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