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Heterogeneous ensembles for predicting survival of metastatic, castrate-resistant prostate cancer patients

Ensemble methods have been successfully applied in a wide range of scenarios, including survival analysis. However, most ensemble models for survival analysis consist of models that all optimize the same loss function and do not fully utilize the diversity in available models. We propose heterogeneo...

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Autores principales: Pölsterl, Sebastian, Gupta, Pankaj, Wang, Lichao, Conjeti, Sailesh, Katouzian, Amin, Navab, Nassir
Formato: Online Artículo Texto
Lenguaje:English
Publicado: F1000Research 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5500862/
https://www.ncbi.nlm.nih.gov/pubmed/28713544
http://dx.doi.org/10.12688/f1000research.8231.3
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author Pölsterl, Sebastian
Gupta, Pankaj
Wang, Lichao
Conjeti, Sailesh
Katouzian, Amin
Navab, Nassir
author_facet Pölsterl, Sebastian
Gupta, Pankaj
Wang, Lichao
Conjeti, Sailesh
Katouzian, Amin
Navab, Nassir
author_sort Pölsterl, Sebastian
collection PubMed
description Ensemble methods have been successfully applied in a wide range of scenarios, including survival analysis. However, most ensemble models for survival analysis consist of models that all optimize the same loss function and do not fully utilize the diversity in available models. We propose heterogeneous survival ensembles that combine several survival models, each optimizing a different loss during training. We evaluated our proposed technique in the context of the Prostate Cancer DREAM Challenge, where the objective was to predict survival of patients with metastatic, castrate-resistant prostate cancer from patient records of four phase III clinical trials. Results demonstrate that a diverse set of survival models were preferred over a single model and that our heterogeneous ensemble of survival models outperformed all competing methods with respect to predicting the exact time of death in the Prostate Cancer DREAM Challenge.
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spelling pubmed-55008622017-07-13 Heterogeneous ensembles for predicting survival of metastatic, castrate-resistant prostate cancer patients Pölsterl, Sebastian Gupta, Pankaj Wang, Lichao Conjeti, Sailesh Katouzian, Amin Navab, Nassir F1000Res Method Article Ensemble methods have been successfully applied in a wide range of scenarios, including survival analysis. However, most ensemble models for survival analysis consist of models that all optimize the same loss function and do not fully utilize the diversity in available models. We propose heterogeneous survival ensembles that combine several survival models, each optimizing a different loss during training. We evaluated our proposed technique in the context of the Prostate Cancer DREAM Challenge, where the objective was to predict survival of patients with metastatic, castrate-resistant prostate cancer from patient records of four phase III clinical trials. Results demonstrate that a diverse set of survival models were preferred over a single model and that our heterogeneous ensemble of survival models outperformed all competing methods with respect to predicting the exact time of death in the Prostate Cancer DREAM Challenge. F1000Research 2017-07-06 /pmc/articles/PMC5500862/ /pubmed/28713544 http://dx.doi.org/10.12688/f1000research.8231.3 Text en Copyright: © 2017 Pölsterl S et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Method Article
Pölsterl, Sebastian
Gupta, Pankaj
Wang, Lichao
Conjeti, Sailesh
Katouzian, Amin
Navab, Nassir
Heterogeneous ensembles for predicting survival of metastatic, castrate-resistant prostate cancer patients
title Heterogeneous ensembles for predicting survival of metastatic, castrate-resistant prostate cancer patients
title_full Heterogeneous ensembles for predicting survival of metastatic, castrate-resistant prostate cancer patients
title_fullStr Heterogeneous ensembles for predicting survival of metastatic, castrate-resistant prostate cancer patients
title_full_unstemmed Heterogeneous ensembles for predicting survival of metastatic, castrate-resistant prostate cancer patients
title_short Heterogeneous ensembles for predicting survival of metastatic, castrate-resistant prostate cancer patients
title_sort heterogeneous ensembles for predicting survival of metastatic, castrate-resistant prostate cancer patients
topic Method Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5500862/
https://www.ncbi.nlm.nih.gov/pubmed/28713544
http://dx.doi.org/10.12688/f1000research.8231.3
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