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Machine learning methods to predict child posttraumatic stress: a proof of concept study
BACKGROUND: The care of traumatized children would benefit significantly from accurate predictive models for Posttraumatic Stress Disorder (PTSD), using information available around the time of trauma. Machine Learning (ML) computational methods have yielded strong results in recent applications acr...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5502325/ https://www.ncbi.nlm.nih.gov/pubmed/28689495 http://dx.doi.org/10.1186/s12888-017-1384-1 |
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author | Saxe, Glenn N. Ma, Sisi Ren, Jiwen Aliferis, Constantin |
author_facet | Saxe, Glenn N. Ma, Sisi Ren, Jiwen Aliferis, Constantin |
author_sort | Saxe, Glenn N. |
collection | PubMed |
description | BACKGROUND: The care of traumatized children would benefit significantly from accurate predictive models for Posttraumatic Stress Disorder (PTSD), using information available around the time of trauma. Machine Learning (ML) computational methods have yielded strong results in recent applications across many diseases and data types, yet they have not been previously applied to childhood PTSD. Since these methods have not been applied to this complex and debilitating disorder, there is a great deal that remains to be learned about their application. The first step is to prove the concept: Can ML methods – as applied in other fields – produce predictive classification models for childhood PTSD? Additionally, we seek to determine if specific variables can be identified – from the aforementioned predictive classification models - with putative causal relations to PTSD. METHODS: ML predictive classification methods – with causal discovery feature selection – were applied to a data set of 163 children hospitalized with an injury and PTSD was determined three months after hospital discharge. At the time of hospitalization, 105 risk factor variables were collected spanning a range of biopsychosocial domains. RESULTS: Seven percent of subjects had a high level of PTSD symptoms. A predictive classification model was discovered with significant predictive accuracy. A predictive model constructed based on subsets of potentially causally relevant features achieves similar predictivity compared to the best predictive model constructed with all variables. Causal Discovery feature selection methods identified 58 variables of which 10 were identified as most stable. CONCLUSIONS: In this first proof-of-concept application of ML methods to predict childhood Posttraumatic Stress we were able to determine both predictive classification models for childhood PTSD and identify several causal variables. This set of techniques has great potential for enhancing the methodological toolkit in the field and future studies should seek to replicate, refine, and extend the results produced in this study. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12888-017-1384-1) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-5502325 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-55023252017-07-10 Machine learning methods to predict child posttraumatic stress: a proof of concept study Saxe, Glenn N. Ma, Sisi Ren, Jiwen Aliferis, Constantin BMC Psychiatry Research Article BACKGROUND: The care of traumatized children would benefit significantly from accurate predictive models for Posttraumatic Stress Disorder (PTSD), using information available around the time of trauma. Machine Learning (ML) computational methods have yielded strong results in recent applications across many diseases and data types, yet they have not been previously applied to childhood PTSD. Since these methods have not been applied to this complex and debilitating disorder, there is a great deal that remains to be learned about their application. The first step is to prove the concept: Can ML methods – as applied in other fields – produce predictive classification models for childhood PTSD? Additionally, we seek to determine if specific variables can be identified – from the aforementioned predictive classification models - with putative causal relations to PTSD. METHODS: ML predictive classification methods – with causal discovery feature selection – were applied to a data set of 163 children hospitalized with an injury and PTSD was determined three months after hospital discharge. At the time of hospitalization, 105 risk factor variables were collected spanning a range of biopsychosocial domains. RESULTS: Seven percent of subjects had a high level of PTSD symptoms. A predictive classification model was discovered with significant predictive accuracy. A predictive model constructed based on subsets of potentially causally relevant features achieves similar predictivity compared to the best predictive model constructed with all variables. Causal Discovery feature selection methods identified 58 variables of which 10 were identified as most stable. CONCLUSIONS: In this first proof-of-concept application of ML methods to predict childhood Posttraumatic Stress we were able to determine both predictive classification models for childhood PTSD and identify several causal variables. This set of techniques has great potential for enhancing the methodological toolkit in the field and future studies should seek to replicate, refine, and extend the results produced in this study. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12888-017-1384-1) contains supplementary material, which is available to authorized users. BioMed Central 2017-07-10 /pmc/articles/PMC5502325/ /pubmed/28689495 http://dx.doi.org/10.1186/s12888-017-1384-1 Text en © The Author(s). 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Saxe, Glenn N. Ma, Sisi Ren, Jiwen Aliferis, Constantin Machine learning methods to predict child posttraumatic stress: a proof of concept study |
title | Machine learning methods to predict child posttraumatic stress: a proof of concept study |
title_full | Machine learning methods to predict child posttraumatic stress: a proof of concept study |
title_fullStr | Machine learning methods to predict child posttraumatic stress: a proof of concept study |
title_full_unstemmed | Machine learning methods to predict child posttraumatic stress: a proof of concept study |
title_short | Machine learning methods to predict child posttraumatic stress: a proof of concept study |
title_sort | machine learning methods to predict child posttraumatic stress: a proof of concept study |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5502325/ https://www.ncbi.nlm.nih.gov/pubmed/28689495 http://dx.doi.org/10.1186/s12888-017-1384-1 |
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