decodeRNA— predicting non-coding RNA functions using guilt-by-association

Although the long non-coding RNA (lncRNA) landscape is expanding rapidly, only a small number of lncRNAs have been functionally annotated. Here, we present decodeRNA (http://www.decoderna.org), a database providing functional contexts for both human lncRNAs and microRNAs in 29 cancer and 12 normal t...

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Detalles Bibliográficos
Autores principales: Lefever, Steve, Anckaert, Jasper, Volders, Pieter-Jan, Luypaert, Manuel, Vandesompele, Jo, Mestdagh, Pieter
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2017
Materias:
Original Article
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5502368/
https://www.ncbi.nlm.nih.gov/pubmed/29220434
http://dx.doi.org/10.1093/database/bax042
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author Lefever, Steve
Anckaert, Jasper
Volders, Pieter-Jan
Luypaert, Manuel
Vandesompele, Jo
Mestdagh, Pieter
author_facet Lefever, Steve
Anckaert, Jasper
Volders, Pieter-Jan
Luypaert, Manuel
Vandesompele, Jo
Mestdagh, Pieter
author_sort Lefever, Steve
collection PubMed
description Although the long non-coding RNA (lncRNA) landscape is expanding rapidly, only a small number of lncRNAs have been functionally annotated. Here, we present decodeRNA (http://www.decoderna.org), a database providing functional contexts for both human lncRNAs and microRNAs in 29 cancer and 12 normal tissue types. With state-of-the-art data mining and visualization options, easy access to results and a straightforward user interface, decodeRNA aims to be a powerful tool for researchers in the ncRNA field. Database URL: http://www.decoderna.org
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spelling pubmed-55023682017-07-20 decodeRNA— predicting non-coding RNA functions using guilt-by-association Lefever, Steve Anckaert, Jasper Volders, Pieter-Jan Luypaert, Manuel Vandesompele, Jo Mestdagh, Pieter Database (Oxford) Original Article Although the long non-coding RNA (lncRNA) landscape is expanding rapidly, only a small number of lncRNAs have been functionally annotated. Here, we present decodeRNA (http://www.decoderna.org), a database providing functional contexts for both human lncRNAs and microRNAs in 29 cancer and 12 normal tissue types. With state-of-the-art data mining and visualization options, easy access to results and a straightforward user interface, decodeRNA aims to be a powerful tool for researchers in the ncRNA field. Database URL: http://www.decoderna.org Oxford University Press 2017-06-11 /pmc/articles/PMC5502368/ /pubmed/29220434 http://dx.doi.org/10.1093/database/bax042 Text en © The Author(s) 2017. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Lefever, Steve
Anckaert, Jasper
Volders, Pieter-Jan
Luypaert, Manuel
Vandesompele, Jo
Mestdagh, Pieter
decodeRNA— predicting non-coding RNA functions using guilt-by-association
title decodeRNA— predicting non-coding RNA functions using guilt-by-association
title_full decodeRNA— predicting non-coding RNA functions using guilt-by-association
title_fullStr decodeRNA— predicting non-coding RNA functions using guilt-by-association
title_full_unstemmed decodeRNA— predicting non-coding RNA functions using guilt-by-association
title_short decodeRNA— predicting non-coding RNA functions using guilt-by-association
title_sort decoderna— predicting non-coding rna functions using guilt-by-association
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5502368/
https://www.ncbi.nlm.nih.gov/pubmed/29220434
http://dx.doi.org/10.1093/database/bax042
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AT luypaertmanuel decodernapredictingnoncodingrnafunctionsusingguiltbyassociation
AT vandesompelejo decodernapredictingnoncodingrnafunctionsusingguiltbyassociation
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