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Fungal Communities in Rhizosphere Soil under Conservation Tillage Shift in Response to Plant Growth
Conservation tillage is an extensively used agricultural practice in northern China that alters soil texture and nutrient conditions, causing changes in the soil microbial community. However, how conservation tillage affects rhizosphere and bulk soil fungal communities during plant growth remains un...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5504275/ https://www.ncbi.nlm.nih.gov/pubmed/28744278 http://dx.doi.org/10.3389/fmicb.2017.01301 |
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author | Wang, Ziting Li, Tong Wen, Xiaoxia Liu, Yang Han, Juan Liao, Yuncheng DeBruyn, Jennifer M. |
author_facet | Wang, Ziting Li, Tong Wen, Xiaoxia Liu, Yang Han, Juan Liao, Yuncheng DeBruyn, Jennifer M. |
author_sort | Wang, Ziting |
collection | PubMed |
description | Conservation tillage is an extensively used agricultural practice in northern China that alters soil texture and nutrient conditions, causing changes in the soil microbial community. However, how conservation tillage affects rhizosphere and bulk soil fungal communities during plant growth remains unclear. The present study investigated the effect of long-term (6 years) conservation (chisel plow, zero) and conventional (plow) tillage during wheat growth on the rhizosphere fungal community, using high-throughput sequencing of the internal transcribed spacer (ITS) gene and quantitative PCR. During tillering, fungal alpha diversity in both rhizosphere and bulk soil were significantly higher under zero tillage compared to other methods. Although tillage had no significant effect during the flowering stage, fungal alpha diversity at this stage was significantly different between rhizosphere and bulk soils, with bulk soil presenting the highest diversity. This was also reflected in the phylogenetic structure of the communities, as rhizosphere soil communities underwent a greater shift from tillering to flowering compared to bulk soil communities. In general, less variation in community structure was observed under zero tillage compared to plow and chisel plow treatments. Changes in the relative abundance of the fungal orders Capnodiales, Pleosporales, and Xylariales contributed the highest to the dissimilarities observed. Structural equation models revealed that the soil fungal communities under the three tillage regimes were likely influenced by the changes in soil properties associated with plant growth. This study suggested that: (1) differences in nutrient resources between rhizosphere and bulk soils can select for different types of fungi thereby increasing community variation during plant growth; (2) tillage can alter fungal communities' variability, with zero tillage promoting more stable communities. This work suggests that long-term changes in tillage regimes may result in unique soil fungal ecology, which might influence other aspects of soil functioning (e.g., decomposition). |
format | Online Article Text |
id | pubmed-5504275 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-55042752017-07-25 Fungal Communities in Rhizosphere Soil under Conservation Tillage Shift in Response to Plant Growth Wang, Ziting Li, Tong Wen, Xiaoxia Liu, Yang Han, Juan Liao, Yuncheng DeBruyn, Jennifer M. Front Microbiol Microbiology Conservation tillage is an extensively used agricultural practice in northern China that alters soil texture and nutrient conditions, causing changes in the soil microbial community. However, how conservation tillage affects rhizosphere and bulk soil fungal communities during plant growth remains unclear. The present study investigated the effect of long-term (6 years) conservation (chisel plow, zero) and conventional (plow) tillage during wheat growth on the rhizosphere fungal community, using high-throughput sequencing of the internal transcribed spacer (ITS) gene and quantitative PCR. During tillering, fungal alpha diversity in both rhizosphere and bulk soil were significantly higher under zero tillage compared to other methods. Although tillage had no significant effect during the flowering stage, fungal alpha diversity at this stage was significantly different between rhizosphere and bulk soils, with bulk soil presenting the highest diversity. This was also reflected in the phylogenetic structure of the communities, as rhizosphere soil communities underwent a greater shift from tillering to flowering compared to bulk soil communities. In general, less variation in community structure was observed under zero tillage compared to plow and chisel plow treatments. Changes in the relative abundance of the fungal orders Capnodiales, Pleosporales, and Xylariales contributed the highest to the dissimilarities observed. Structural equation models revealed that the soil fungal communities under the three tillage regimes were likely influenced by the changes in soil properties associated with plant growth. This study suggested that: (1) differences in nutrient resources between rhizosphere and bulk soils can select for different types of fungi thereby increasing community variation during plant growth; (2) tillage can alter fungal communities' variability, with zero tillage promoting more stable communities. This work suggests that long-term changes in tillage regimes may result in unique soil fungal ecology, which might influence other aspects of soil functioning (e.g., decomposition). Frontiers Media S.A. 2017-07-11 /pmc/articles/PMC5504275/ /pubmed/28744278 http://dx.doi.org/10.3389/fmicb.2017.01301 Text en Copyright © 2017 Wang, Li, Wen, Liu, Han, Liao and DeBruyn. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Wang, Ziting Li, Tong Wen, Xiaoxia Liu, Yang Han, Juan Liao, Yuncheng DeBruyn, Jennifer M. Fungal Communities in Rhizosphere Soil under Conservation Tillage Shift in Response to Plant Growth |
title | Fungal Communities in Rhizosphere Soil under Conservation Tillage Shift in Response to Plant Growth |
title_full | Fungal Communities in Rhizosphere Soil under Conservation Tillage Shift in Response to Plant Growth |
title_fullStr | Fungal Communities in Rhizosphere Soil under Conservation Tillage Shift in Response to Plant Growth |
title_full_unstemmed | Fungal Communities in Rhizosphere Soil under Conservation Tillage Shift in Response to Plant Growth |
title_short | Fungal Communities in Rhizosphere Soil under Conservation Tillage Shift in Response to Plant Growth |
title_sort | fungal communities in rhizosphere soil under conservation tillage shift in response to plant growth |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5504275/ https://www.ncbi.nlm.nih.gov/pubmed/28744278 http://dx.doi.org/10.3389/fmicb.2017.01301 |
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