Cargando…

Genome-resolved metaproteomic characterization of preterm infant gut microbiota development reveals species-specific metabolic shifts and variabilities during early life

BACKGROUND: Establishment of the human gut microbiota begins at birth. This early-life microbiota development can impact host physiology during infancy and even across an entire life span. However, the functional stability and population structure of the gut microbiota during initial colonization re...

Descripción completa

Detalles Bibliográficos
Autores principales:	Xiong, Weili, Brown, Christopher T., Morowitz, Michael J., Banfield, Jillian F., Hettich, Robert L.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2017
Materias:	Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5504695/ https://www.ncbi.nlm.nih.gov/pubmed/28693612 http://dx.doi.org/10.1186/s40168-017-0290-6

Ejemplares similares

Development of an Enhanced Metaproteomic Approach for Deepening the Microbiome Characterization of the Human Infant Gut
por: Xiong, Weili, et al.
Publicado: (2014)

Strain-resolved microbial community proteomics reveals simultaneous aerobic and anaerobic function during gastrointestinal tract colonization of a preterm infant
por: Brooks, Brandon, et al.
Publicado: (2015)

Genome resolved analysis of a premature infant gut microbial community reveals a Varibaculum cambriense genome and a shift towards fermentation-based metabolism during the third week of life
por: Brown, Christopher T, et al.
Publicado: (2013)

Time series community genomics analysis reveals rapid shifts in bacterial species, strains, and phage during infant gut colonization
por: Sharon, Itai, et al.
Publicado: (2013)

Hospitalized Premature Infants Are Colonized by Related Bacterial Strains with Distinct Proteomic Profiles
por: Brown, Christopher T., et al.
Publicado: (2018)

Antibiotic resistance and host immune system-induced metal bactericidal control are key factors for microbial persistence in the developing human preterm infant gut microbiome
por: Peters, Samantha L., et al.
Publicado: (2022)

Williams–Beuren syndrome shapes the gut microbiota metaproteome
por: Marzano, Valeria, et al.
Publicado: (2023)

Genome-resolved metagenomics of eukaryotic populations during early colonization of premature infants and in hospital rooms
por: Olm, Matthew R., et al.
Publicado: (2019)

Strain-resolved analysis of hospital rooms and infants reveals overlap between the human and room microbiome
por: Brooks, Brandon, et al.
Publicado: (2017)

Machine Learning Leveraging Genomes from Metagenomes Identifies Influential Antibiotic Resistance Genes in the Infant Gut Microbiome
por: Rahman, Sumayah F., et al.
Publicado: (2018)

Metaproteomics as a Complementary Approach to Gut Microbiota in Health and Disease
por: Petriz, Bernardo A., et al.
Publicado: (2017)

Metaproteomic analysis of human gut microbiota: where are we heading?
por: Lee, Pey Yee, et al.
Publicado: (2017)

The impact of sequence database choice on metaproteomic results in gut microbiota studies
por: Tanca, Alessandro, et al.
Publicado: (2016)

Data-independent acquisition boosts quantitative metaproteomics for deep characterization of gut microbiota
por: Zhao, Jinzhi, et al.
Publicado: (2023)

Microbes in the neonatal intensive care unit resemble those found in the gut of premature infants
por: Brooks, Brandon, et al.
Publicado: (2014)

Combined analysis of microbial metagenomic and metatranscriptomic sequencing data to assess in situ physiological conditions in the premature infant gut
por: Sher, Yonatan, et al.
Publicado: (2020)

Metaproteomics reveals persistent and phylum-redundant metabolic functional stability in adult human gut microbiomes of Crohn’s remission patients despite temporal variations in microbial taxa, genomes, and proteomes
por: Blakeley-Ruiz, J. Alfredo, et al.
Publicado: (2019)

Integrated Metagenomics/Metaproteomics Reveals Human Host-Microbiota Signatures of Crohn's Disease
por: Erickson, Alison R., et al.
Publicado: (2012)

Statistical Evaluation of Metaproteomics and 16S rRNA Amplicon Sequencing Techniques for Study of Gut Microbiota Establishment in Infants with Cystic Fibrosis
por: Saralegui, Claudia, et al.
Publicado: (2022)

Identical bacterial populations colonize premature infant gut, skin, and oral microbiomes and exhibit different in situ growth rates
por: Olm, Matthew R., et al.
Publicado: (2017)

Metaproteomic Analysis of Gut Resistome in the Cecal Microbiota of Fattening Pigs Raised without Antibiotics
por: Buthasane, Pamornya, et al.
Publicado: (2023)

Feeding intolerance alters the gut microbiota of preterm infants
por: Yuan, Zhenya, et al.
Publicado: (2019)

The Effects of Genetic Relatedness on the Preterm Infant Gut Microbiota
por: Lim, Shen Jean, et al.
Publicado: (2021)

The effect of probiotic supplementation on the gut microbiota of preterm infants
por: Plummer, Erica L., et al.
Publicado: (2021)

Metaproteomics as a tool for studying the protein landscape of human-gut bacterial species
por: Stamboulian, Moses, et al.
Publicado: (2022)

Infant gut strain persistence is associated with maternal origin, phylogeny, and traits including surface adhesion and iron acquisition
por: Lou, Yue Clare, et al.
Publicado: (2021)

MetaPro-IQ: a universal metaproteomic approach to studying human and mouse gut microbiota
por: Zhang, Xu, et al.
Publicado: (2016)

Using strain-resolved analysis to identify contamination in metagenomics data
por: Lou, Yue Clare, et al.
Publicado: (2023)

Analysis of the infant gut microbiome reveals metabolic functional roles associated with healthy infants and infants with atopic dermatitis using metaproteomics
por: Kingkaw, Amornthep, et al.
Publicado: (2020)

Metaproteomics—An Advantageous Option in Studies of Host-Microbiota Interaction
por: Karaduta, Oleg, et al.
Publicado: (2021)

Mining gut microbiome oligopeptides by functional metaproteome display
por: Zantow, Jonas, et al.
Publicado: (2016)

Metaproteomic profiling of fungal gut colonization in gnotobiotic mice
por: Pettersen, Veronika Kuchařová, et al.
Publicado: (2022)

Five key aspects of metaproteomics as a tool to understand functional interactions in host-associated microbiomes
por: Salvato, Fernanda, et al.
Publicado: (2021)

Functional and Taxonomic Traits of the Gut Microbiota in Type 1 Diabetes Children at the Onset: A Metaproteomic Study
por: Levi Mortera, Stefano, et al.
Publicado: (2022)

Experimental validation that human microbiome phages use alternative genetic coding
por: Peters, Samantha L., et al.
Publicado: (2022)

Gut bacteria are rarely shared by co-hospitalized premature infants, regardless of necrotizing enterocolitis development
por: Raveh-Sadka, Tali, et al.
Publicado: (2015)

Dynamic Changes of the Gut Microbiota in Preterm Infants With Different Gestational Age
por: Jia, Qiong, et al.
Publicado: (2022)

Alteration of the gut microbiota after surgery in preterm infants with necrotizing enterocolitis
por: Lin, Huijia, et al.
Publicado: (2023)

Bridging the Gap between Gut Microbiota and Alzheimer’s Disease: A Metaproteomic Approach for Biomarker Discovery in Transgenic Mice
por: Ayan, Esra, et al.
Publicado: (2023)

Metaproteomics characterizes human gut microbiome function in colorectal cancer
por: Long, Shuping, et al.
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_9r5fhurvssl1r11365vi46u06u