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Texture analysis of pulmonary parenchymateous changes related to pulmonary thromboembolism in dogs – a novel approach using quantitative methods
BACKGROUND: Diagnosis of pulmonary thromboembolism (PTE) in dogs relies on computed tomography pulmonary angiography (CTPA), but detailed interpretation of CTPA images is demanding for the radiologist and only large vessels may be evaluated. New approaches for better detection of smaller thrombi inc...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5505049/ https://www.ncbi.nlm.nih.gov/pubmed/28697731 http://dx.doi.org/10.1186/s12917-017-1117-1 |
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author | Marschner, C. B. Kokla, M. Amigo, J. M. Rozanski, E. A. Wiinberg, B. McEvoy, F. J. |
author_facet | Marschner, C. B. Kokla, M. Amigo, J. M. Rozanski, E. A. Wiinberg, B. McEvoy, F. J. |
author_sort | Marschner, C. B. |
collection | PubMed |
description | BACKGROUND: Diagnosis of pulmonary thromboembolism (PTE) in dogs relies on computed tomography pulmonary angiography (CTPA), but detailed interpretation of CTPA images is demanding for the radiologist and only large vessels may be evaluated. New approaches for better detection of smaller thrombi include dual energy computed tomography (DECT) as well as computer assisted diagnosis (CAD) techniques. The purpose of this study was to investigate the performance of quantitative texture analysis for detecting dogs with PTE using grey-level co-occurrence matrices (GLCM) and multivariate statistical classification analyses. CT images from healthy (n = 6) and diseased (n = 29) dogs with and without PTE confirmed on CTPA were segmented so that only tissue with CT numbers between −1024 and −250 Houndsfield Units (HU) was preserved. GLCM analysis and subsequent multivariate classification analyses were performed on texture parameters extracted from these images. RESULTS: Leave-one-dog-out cross validation and receiver operator characteristic (ROC) showed that the models generated from the texture analysis were able to predict healthy dogs with optimal levels of performance. Partial Least Square Discriminant Analysis (PLS-DA) obtained a sensitivity of 94% and a specificity of 96%, while Support Vector Machines (SVM) yielded a sensitivity of 99% and a specificity of 100%. The models, however, performed worse in classifying the type of disease in the diseased dog group: In diseased dogs with PTE sensitivities were 30% (PLS-DA) and 38% (SVM), and specificities were 80% (PLS-DA) and 89% (SVM). In diseased dogs without PTE the sensitivities of the models were 59% (PLS-DA) and 79% (SVM) and specificities were 79% (PLS-DA) and 82% (SVM). CONCLUSION: The results indicate that texture analysis of CTPA images using GLCM is an effective tool for distinguishing healthy from abnormal lung. Furthermore the texture of pulmonary parenchyma in dogs with PTE is altered, when compared to the texture of pulmonary parenchyma of healthy dogs. The models’ poorer performance in classifying dogs within the diseased group, may be related to the low number of dogs compared to texture variables, a lack of balanced number of dogs within each group or a real lack of difference in the texture features among the diseased dogs. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12917-017-1117-1) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-5505049 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-55050492017-07-12 Texture analysis of pulmonary parenchymateous changes related to pulmonary thromboembolism in dogs – a novel approach using quantitative methods Marschner, C. B. Kokla, M. Amigo, J. M. Rozanski, E. A. Wiinberg, B. McEvoy, F. J. BMC Vet Res Research Article BACKGROUND: Diagnosis of pulmonary thromboembolism (PTE) in dogs relies on computed tomography pulmonary angiography (CTPA), but detailed interpretation of CTPA images is demanding for the radiologist and only large vessels may be evaluated. New approaches for better detection of smaller thrombi include dual energy computed tomography (DECT) as well as computer assisted diagnosis (CAD) techniques. The purpose of this study was to investigate the performance of quantitative texture analysis for detecting dogs with PTE using grey-level co-occurrence matrices (GLCM) and multivariate statistical classification analyses. CT images from healthy (n = 6) and diseased (n = 29) dogs with and without PTE confirmed on CTPA were segmented so that only tissue with CT numbers between −1024 and −250 Houndsfield Units (HU) was preserved. GLCM analysis and subsequent multivariate classification analyses were performed on texture parameters extracted from these images. RESULTS: Leave-one-dog-out cross validation and receiver operator characteristic (ROC) showed that the models generated from the texture analysis were able to predict healthy dogs with optimal levels of performance. Partial Least Square Discriminant Analysis (PLS-DA) obtained a sensitivity of 94% and a specificity of 96%, while Support Vector Machines (SVM) yielded a sensitivity of 99% and a specificity of 100%. The models, however, performed worse in classifying the type of disease in the diseased dog group: In diseased dogs with PTE sensitivities were 30% (PLS-DA) and 38% (SVM), and specificities were 80% (PLS-DA) and 89% (SVM). In diseased dogs without PTE the sensitivities of the models were 59% (PLS-DA) and 79% (SVM) and specificities were 79% (PLS-DA) and 82% (SVM). CONCLUSION: The results indicate that texture analysis of CTPA images using GLCM is an effective tool for distinguishing healthy from abnormal lung. Furthermore the texture of pulmonary parenchyma in dogs with PTE is altered, when compared to the texture of pulmonary parenchyma of healthy dogs. The models’ poorer performance in classifying dogs within the diseased group, may be related to the low number of dogs compared to texture variables, a lack of balanced number of dogs within each group or a real lack of difference in the texture features among the diseased dogs. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12917-017-1117-1) contains supplementary material, which is available to authorized users. BioMed Central 2017-07-11 /pmc/articles/PMC5505049/ /pubmed/28697731 http://dx.doi.org/10.1186/s12917-017-1117-1 Text en © The Author(s). 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Marschner, C. B. Kokla, M. Amigo, J. M. Rozanski, E. A. Wiinberg, B. McEvoy, F. J. Texture analysis of pulmonary parenchymateous changes related to pulmonary thromboembolism in dogs – a novel approach using quantitative methods |
title | Texture analysis of pulmonary parenchymateous changes related to pulmonary thromboembolism in dogs – a novel approach using quantitative methods |
title_full | Texture analysis of pulmonary parenchymateous changes related to pulmonary thromboembolism in dogs – a novel approach using quantitative methods |
title_fullStr | Texture analysis of pulmonary parenchymateous changes related to pulmonary thromboembolism in dogs – a novel approach using quantitative methods |
title_full_unstemmed | Texture analysis of pulmonary parenchymateous changes related to pulmonary thromboembolism in dogs – a novel approach using quantitative methods |
title_short | Texture analysis of pulmonary parenchymateous changes related to pulmonary thromboembolism in dogs – a novel approach using quantitative methods |
title_sort | texture analysis of pulmonary parenchymateous changes related to pulmonary thromboembolism in dogs – a novel approach using quantitative methods |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5505049/ https://www.ncbi.nlm.nih.gov/pubmed/28697731 http://dx.doi.org/10.1186/s12917-017-1117-1 |
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