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Development of a Method to Extract and Amplify the Complete Mitogenome of Some Sparidae Species
Previous studies showed that fish mitochondrial DNA (mtDNA) is set up by a closed circular molecule of 16-17 kilobases (kb), comprising 2 ribosomal RNA genes (rRNA), 22 transfer RNA genes (tRNA), 13 protein-coding genes and 2 non-coding regions. The analysis of single mtDNA genes, such as Cytb, COI,...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PAGEPress Publications, Pavia, Italy
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5505091/ https://www.ncbi.nlm.nih.gov/pubmed/28713786 http://dx.doi.org/10.4081/ijfs.2017.6154 |
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author | Mascolo, Celestina Ceruso, Marina Sordino, Paolo Palma, Giuseppe Anastasio, Aniello Pepe, Tiziana |
author_facet | Mascolo, Celestina Ceruso, Marina Sordino, Paolo Palma, Giuseppe Anastasio, Aniello Pepe, Tiziana |
author_sort | Mascolo, Celestina |
collection | PubMed |
description | Previous studies showed that fish mitochondrial DNA (mtDNA) is set up by a closed circular molecule of 16-17 kilobases (kb), comprising 2 ribosomal RNA genes (rRNA), 22 transfer RNA genes (tRNA), 13 protein-coding genes and 2 non-coding regions. The analysis of single mtDNA genes, such as Cytb, COI, 16S and 12S, or short segment of them, has been widely used against species substitution in both fresh and processed fish products. The analysis of the complete mitochondrial genome of fishery products allows to better study and characterise fish species. The aim of this research was to extract and amplify the complete mtDNA of some fish species of commercial interest belonging to the Sparidae family. The studied species were Dentex dentex, Dentex gibbosus, Dentex nufar, Pagellus acarne and Pagellus erythrinus. The entire mitogenome was obtained by gene amplification using long polymerase chain reactions. The analysis of the complete mitochondrial sequences will allow to gain further insights on these species and to find polymorphic sites that assess the degree of genetic variability of the species belonging to the family Sparidae. |
format | Online Article Text |
id | pubmed-5505091 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | PAGEPress Publications, Pavia, Italy |
record_format | MEDLINE/PubMed |
spelling | pubmed-55050912017-07-14 Development of a Method to Extract and Amplify the Complete Mitogenome of Some Sparidae Species Mascolo, Celestina Ceruso, Marina Sordino, Paolo Palma, Giuseppe Anastasio, Aniello Pepe, Tiziana Ital J Food Saf Article Previous studies showed that fish mitochondrial DNA (mtDNA) is set up by a closed circular molecule of 16-17 kilobases (kb), comprising 2 ribosomal RNA genes (rRNA), 22 transfer RNA genes (tRNA), 13 protein-coding genes and 2 non-coding regions. The analysis of single mtDNA genes, such as Cytb, COI, 16S and 12S, or short segment of them, has been widely used against species substitution in both fresh and processed fish products. The analysis of the complete mitochondrial genome of fishery products allows to better study and characterise fish species. The aim of this research was to extract and amplify the complete mtDNA of some fish species of commercial interest belonging to the Sparidae family. The studied species were Dentex dentex, Dentex gibbosus, Dentex nufar, Pagellus acarne and Pagellus erythrinus. The entire mitogenome was obtained by gene amplification using long polymerase chain reactions. The analysis of the complete mitochondrial sequences will allow to gain further insights on these species and to find polymorphic sites that assess the degree of genetic variability of the species belonging to the family Sparidae. PAGEPress Publications, Pavia, Italy 2017-06-22 /pmc/articles/PMC5505091/ /pubmed/28713786 http://dx.doi.org/10.4081/ijfs.2017.6154 Text en ©Copyright C. Mascolo et al., 2017 http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Article Mascolo, Celestina Ceruso, Marina Sordino, Paolo Palma, Giuseppe Anastasio, Aniello Pepe, Tiziana Development of a Method to Extract and Amplify the Complete Mitogenome of Some Sparidae Species |
title | Development of a Method to Extract and Amplify the Complete Mitogenome of Some Sparidae Species |
title_full | Development of a Method to Extract and Amplify the Complete Mitogenome of Some Sparidae Species |
title_fullStr | Development of a Method to Extract and Amplify the Complete Mitogenome of Some Sparidae Species |
title_full_unstemmed | Development of a Method to Extract and Amplify the Complete Mitogenome of Some Sparidae Species |
title_short | Development of a Method to Extract and Amplify the Complete Mitogenome of Some Sparidae Species |
title_sort | development of a method to extract and amplify the complete mitogenome of some sparidae species |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5505091/ https://www.ncbi.nlm.nih.gov/pubmed/28713786 http://dx.doi.org/10.4081/ijfs.2017.6154 |
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