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Development of a Method to Extract and Amplify the Complete Mitogenome of Some Sparidae Species

Previous studies showed that fish mitochondrial DNA (mtDNA) is set up by a closed circular molecule of 16-17 kilobases (kb), comprising 2 ribosomal RNA genes (rRNA), 22 transfer RNA genes (tRNA), 13 protein-coding genes and 2 non-coding regions. The analysis of single mtDNA genes, such as Cytb, COI,...

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Autores principales: Mascolo, Celestina, Ceruso, Marina, Sordino, Paolo, Palma, Giuseppe, Anastasio, Aniello, Pepe, Tiziana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PAGEPress Publications, Pavia, Italy 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5505091/
https://www.ncbi.nlm.nih.gov/pubmed/28713786
http://dx.doi.org/10.4081/ijfs.2017.6154
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author Mascolo, Celestina
Ceruso, Marina
Sordino, Paolo
Palma, Giuseppe
Anastasio, Aniello
Pepe, Tiziana
author_facet Mascolo, Celestina
Ceruso, Marina
Sordino, Paolo
Palma, Giuseppe
Anastasio, Aniello
Pepe, Tiziana
author_sort Mascolo, Celestina
collection PubMed
description Previous studies showed that fish mitochondrial DNA (mtDNA) is set up by a closed circular molecule of 16-17 kilobases (kb), comprising 2 ribosomal RNA genes (rRNA), 22 transfer RNA genes (tRNA), 13 protein-coding genes and 2 non-coding regions. The analysis of single mtDNA genes, such as Cytb, COI, 16S and 12S, or short segment of them, has been widely used against species substitution in both fresh and processed fish products. The analysis of the complete mitochondrial genome of fishery products allows to better study and characterise fish species. The aim of this research was to extract and amplify the complete mtDNA of some fish species of commercial interest belonging to the Sparidae family. The studied species were Dentex dentex, Dentex gibbosus, Dentex nufar, Pagellus acarne and Pagellus erythrinus. The entire mitogenome was obtained by gene amplification using long polymerase chain reactions. The analysis of the complete mitochondrial sequences will allow to gain further insights on these species and to find polymorphic sites that assess the degree of genetic variability of the species belonging to the family Sparidae.
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spelling pubmed-55050912017-07-14 Development of a Method to Extract and Amplify the Complete Mitogenome of Some Sparidae Species Mascolo, Celestina Ceruso, Marina Sordino, Paolo Palma, Giuseppe Anastasio, Aniello Pepe, Tiziana Ital J Food Saf Article Previous studies showed that fish mitochondrial DNA (mtDNA) is set up by a closed circular molecule of 16-17 kilobases (kb), comprising 2 ribosomal RNA genes (rRNA), 22 transfer RNA genes (tRNA), 13 protein-coding genes and 2 non-coding regions. The analysis of single mtDNA genes, such as Cytb, COI, 16S and 12S, or short segment of them, has been widely used against species substitution in both fresh and processed fish products. The analysis of the complete mitochondrial genome of fishery products allows to better study and characterise fish species. The aim of this research was to extract and amplify the complete mtDNA of some fish species of commercial interest belonging to the Sparidae family. The studied species were Dentex dentex, Dentex gibbosus, Dentex nufar, Pagellus acarne and Pagellus erythrinus. The entire mitogenome was obtained by gene amplification using long polymerase chain reactions. The analysis of the complete mitochondrial sequences will allow to gain further insights on these species and to find polymorphic sites that assess the degree of genetic variability of the species belonging to the family Sparidae. PAGEPress Publications, Pavia, Italy 2017-06-22 /pmc/articles/PMC5505091/ /pubmed/28713786 http://dx.doi.org/10.4081/ijfs.2017.6154 Text en ©Copyright C. Mascolo et al., 2017 http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Article
Mascolo, Celestina
Ceruso, Marina
Sordino, Paolo
Palma, Giuseppe
Anastasio, Aniello
Pepe, Tiziana
Development of a Method to Extract and Amplify the Complete Mitogenome of Some Sparidae Species
title Development of a Method to Extract and Amplify the Complete Mitogenome of Some Sparidae Species
title_full Development of a Method to Extract and Amplify the Complete Mitogenome of Some Sparidae Species
title_fullStr Development of a Method to Extract and Amplify the Complete Mitogenome of Some Sparidae Species
title_full_unstemmed Development of a Method to Extract and Amplify the Complete Mitogenome of Some Sparidae Species
title_short Development of a Method to Extract and Amplify the Complete Mitogenome of Some Sparidae Species
title_sort development of a method to extract and amplify the complete mitogenome of some sparidae species
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5505091/
https://www.ncbi.nlm.nih.gov/pubmed/28713786
http://dx.doi.org/10.4081/ijfs.2017.6154
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