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Transglycosylation by a chitinase from Enterobacter cloacae subsp. cloacae generates longer chitin oligosaccharides

Humans have exploited natural resources for a variety of applications. Chitin and its derivative chitin oligosaccharides (CHOS) have potential biomedical and agricultural applications. Availability of CHOS with the desired length has been a major limitation in the optimum use of such natural resourc...

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Autores principales: Mallakuntla, Mohan Krishna, Vaikuntapu, Papa Rao, Bhuvanachandra, Bhoopal, Das, Subha Narayan, Podile, Appa Rao
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5505975/
https://www.ncbi.nlm.nih.gov/pubmed/28698589
http://dx.doi.org/10.1038/s41598-017-05140-3
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author Mallakuntla, Mohan Krishna
Vaikuntapu, Papa Rao
Bhuvanachandra, Bhoopal
Das, Subha Narayan
Podile, Appa Rao
author_facet Mallakuntla, Mohan Krishna
Vaikuntapu, Papa Rao
Bhuvanachandra, Bhoopal
Das, Subha Narayan
Podile, Appa Rao
author_sort Mallakuntla, Mohan Krishna
collection PubMed
description Humans have exploited natural resources for a variety of applications. Chitin and its derivative chitin oligosaccharides (CHOS) have potential biomedical and agricultural applications. Availability of CHOS with the desired length has been a major limitation in the optimum use of such natural resources. Here, we report a single domain hyper-transglycosylating chitinase, which generates longer CHOS, from Enterobacter cloacae subsp. cloacae 13047 (EcChi1). EcChi1 was optimally active at pH 5.0 and 40 °C with a K(m) of 15.2 mg ml(−1), and k (cat)/K(m) of 0.011× 10(2) mg(−1) ml min(−1) on colloidal chitin. The profile of the hydrolytic products, major product being chitobiose, released from CHOS indicated that EcChi1 was an endo-acting enzyme. Transglycosylation (TG) by EcChi1 on trimeric to hexameric CHOS resulted in the formation of longer CHOS for a prolonged duration. EcChi1 showed both chitobiase and TG activities, in addition to hydrolytic activity. The TG by EcChi1 was dependent, to some extent, on the length of the CHOS substrate and concentration of the enzyme. Homology modeling and docking with CHOS suggested that EcChi1 has a deep substrate-binding groove lined with aromatic amino acids, which is a characteristic feature of a processive enzyme.
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spelling pubmed-55059752017-07-13 Transglycosylation by a chitinase from Enterobacter cloacae subsp. cloacae generates longer chitin oligosaccharides Mallakuntla, Mohan Krishna Vaikuntapu, Papa Rao Bhuvanachandra, Bhoopal Das, Subha Narayan Podile, Appa Rao Sci Rep Article Humans have exploited natural resources for a variety of applications. Chitin and its derivative chitin oligosaccharides (CHOS) have potential biomedical and agricultural applications. Availability of CHOS with the desired length has been a major limitation in the optimum use of such natural resources. Here, we report a single domain hyper-transglycosylating chitinase, which generates longer CHOS, from Enterobacter cloacae subsp. cloacae 13047 (EcChi1). EcChi1 was optimally active at pH 5.0 and 40 °C with a K(m) of 15.2 mg ml(−1), and k (cat)/K(m) of 0.011× 10(2) mg(−1) ml min(−1) on colloidal chitin. The profile of the hydrolytic products, major product being chitobiose, released from CHOS indicated that EcChi1 was an endo-acting enzyme. Transglycosylation (TG) by EcChi1 on trimeric to hexameric CHOS resulted in the formation of longer CHOS for a prolonged duration. EcChi1 showed both chitobiase and TG activities, in addition to hydrolytic activity. The TG by EcChi1 was dependent, to some extent, on the length of the CHOS substrate and concentration of the enzyme. Homology modeling and docking with CHOS suggested that EcChi1 has a deep substrate-binding groove lined with aromatic amino acids, which is a characteristic feature of a processive enzyme. Nature Publishing Group UK 2017-07-11 /pmc/articles/PMC5505975/ /pubmed/28698589 http://dx.doi.org/10.1038/s41598-017-05140-3 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Mallakuntla, Mohan Krishna
Vaikuntapu, Papa Rao
Bhuvanachandra, Bhoopal
Das, Subha Narayan
Podile, Appa Rao
Transglycosylation by a chitinase from Enterobacter cloacae subsp. cloacae generates longer chitin oligosaccharides
title Transglycosylation by a chitinase from Enterobacter cloacae subsp. cloacae generates longer chitin oligosaccharides
title_full Transglycosylation by a chitinase from Enterobacter cloacae subsp. cloacae generates longer chitin oligosaccharides
title_fullStr Transglycosylation by a chitinase from Enterobacter cloacae subsp. cloacae generates longer chitin oligosaccharides
title_full_unstemmed Transglycosylation by a chitinase from Enterobacter cloacae subsp. cloacae generates longer chitin oligosaccharides
title_short Transglycosylation by a chitinase from Enterobacter cloacae subsp. cloacae generates longer chitin oligosaccharides
title_sort transglycosylation by a chitinase from enterobacter cloacae subsp. cloacae generates longer chitin oligosaccharides
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5505975/
https://www.ncbi.nlm.nih.gov/pubmed/28698589
http://dx.doi.org/10.1038/s41598-017-05140-3
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