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Caenorhabditis elegans orthologs of human genes differentially expressed with age are enriched for determinants of longevity
We report a systematic RNAi longevity screen of 82 Caenorhabditis elegans genes selected based on orthology to human genes differentially expressed with age. We find substantial enrichment in genes for which knockdown increased lifespan. This enrichment is markedly higher than published genomewide l...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5506438/ https://www.ncbi.nlm.nih.gov/pubmed/28401650 http://dx.doi.org/10.1111/acel.12595 |
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author | Sutphin, George L. Backer, Grant Sheehan, Susan Bean, Shannon Corban, Caroline Liu, Teresa Peters, Marjolein J. van Meurs, Joyce B. J. Murabito, Joanne M. Johnson, Andrew D. Korstanje, Ron |
author_facet | Sutphin, George L. Backer, Grant Sheehan, Susan Bean, Shannon Corban, Caroline Liu, Teresa Peters, Marjolein J. van Meurs, Joyce B. J. Murabito, Joanne M. Johnson, Andrew D. Korstanje, Ron |
author_sort | Sutphin, George L. |
collection | PubMed |
description | We report a systematic RNAi longevity screen of 82 Caenorhabditis elegans genes selected based on orthology to human genes differentially expressed with age. We find substantial enrichment in genes for which knockdown increased lifespan. This enrichment is markedly higher than published genomewide longevity screens in C. elegans and similar to screens that preselected candidates based on longevity‐correlated metrics (e.g., stress resistance). Of the 50 genes that affected lifespan, 46 were previously unreported. The five genes with the greatest impact on lifespan (>20% extension) encode the enzyme kynureninase (kynu‐1), a neuronal leucine‐rich repeat protein (iglr‐1), a tetraspanin (tsp‐3), a regulator of calcineurin (rcan‐1), and a voltage‐gated calcium channel subunit (unc‐36). Knockdown of each gene extended healthspan without impairing reproduction. kynu‐1(RNAi) alone delayed pathology in C. elegans models of Alzheimer's disease and Huntington's disease. Each gene displayed a distinct pattern of interaction with known aging pathways. In the context of published work, kynu‐1, tsp‐3, and rcan‐1 are of particular interest for immediate follow‐up. kynu‐1 is an understudied member of the kynurenine metabolic pathway with a mechanistically distinct impact on lifespan. Our data suggest that tsp‐3 is a novel modulator of hypoxic signaling and rcan‐1 is a context‐specific calcineurin regulator. Our results validate C. elegans as a comparative tool for prioritizing human candidate aging genes, confirm age‐associated gene expression data as valuable source of novel longevity determinants, and prioritize select genes for mechanistic follow‐up. |
format | Online Article Text |
id | pubmed-5506438 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-55064382017-08-01 Caenorhabditis elegans orthologs of human genes differentially expressed with age are enriched for determinants of longevity Sutphin, George L. Backer, Grant Sheehan, Susan Bean, Shannon Corban, Caroline Liu, Teresa Peters, Marjolein J. van Meurs, Joyce B. J. Murabito, Joanne M. Johnson, Andrew D. Korstanje, Ron Aging Cell Original Articles We report a systematic RNAi longevity screen of 82 Caenorhabditis elegans genes selected based on orthology to human genes differentially expressed with age. We find substantial enrichment in genes for which knockdown increased lifespan. This enrichment is markedly higher than published genomewide longevity screens in C. elegans and similar to screens that preselected candidates based on longevity‐correlated metrics (e.g., stress resistance). Of the 50 genes that affected lifespan, 46 were previously unreported. The five genes with the greatest impact on lifespan (>20% extension) encode the enzyme kynureninase (kynu‐1), a neuronal leucine‐rich repeat protein (iglr‐1), a tetraspanin (tsp‐3), a regulator of calcineurin (rcan‐1), and a voltage‐gated calcium channel subunit (unc‐36). Knockdown of each gene extended healthspan without impairing reproduction. kynu‐1(RNAi) alone delayed pathology in C. elegans models of Alzheimer's disease and Huntington's disease. Each gene displayed a distinct pattern of interaction with known aging pathways. In the context of published work, kynu‐1, tsp‐3, and rcan‐1 are of particular interest for immediate follow‐up. kynu‐1 is an understudied member of the kynurenine metabolic pathway with a mechanistically distinct impact on lifespan. Our data suggest that tsp‐3 is a novel modulator of hypoxic signaling and rcan‐1 is a context‐specific calcineurin regulator. Our results validate C. elegans as a comparative tool for prioritizing human candidate aging genes, confirm age‐associated gene expression data as valuable source of novel longevity determinants, and prioritize select genes for mechanistic follow‐up. John Wiley and Sons Inc. 2017-04-12 2017-08 /pmc/articles/PMC5506438/ /pubmed/28401650 http://dx.doi.org/10.1111/acel.12595 Text en © 2017 The Authors. Aging Cell published by the Anatomical Society and John Wiley & Sons Ltd. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Articles Sutphin, George L. Backer, Grant Sheehan, Susan Bean, Shannon Corban, Caroline Liu, Teresa Peters, Marjolein J. van Meurs, Joyce B. J. Murabito, Joanne M. Johnson, Andrew D. Korstanje, Ron Caenorhabditis elegans orthologs of human genes differentially expressed with age are enriched for determinants of longevity |
title |
Caenorhabditis elegans orthologs of human genes differentially expressed with age are enriched for determinants of longevity |
title_full |
Caenorhabditis elegans orthologs of human genes differentially expressed with age are enriched for determinants of longevity |
title_fullStr |
Caenorhabditis elegans orthologs of human genes differentially expressed with age are enriched for determinants of longevity |
title_full_unstemmed |
Caenorhabditis elegans orthologs of human genes differentially expressed with age are enriched for determinants of longevity |
title_short |
Caenorhabditis elegans orthologs of human genes differentially expressed with age are enriched for determinants of longevity |
title_sort | caenorhabditis elegans orthologs of human genes differentially expressed with age are enriched for determinants of longevity |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5506438/ https://www.ncbi.nlm.nih.gov/pubmed/28401650 http://dx.doi.org/10.1111/acel.12595 |
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