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Completeness of Community Structure in Networks
By defining a new measure to community structure, exclusive modularity, and based on cavity method of statistical physics, we develop a mathematically principled method to determine the completeness of community structure, which represents whether a partition that is either annotated by experts or g...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5509661/ https://www.ncbi.nlm.nih.gov/pubmed/28706197 http://dx.doi.org/10.1038/s41598-017-05585-6 |
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author | Xie, Jia-Rong Zhang, Pan Zhang, Hai-Feng Wang, Bing-Hong |
author_facet | Xie, Jia-Rong Zhang, Pan Zhang, Hai-Feng Wang, Bing-Hong |
author_sort | Xie, Jia-Rong |
collection | PubMed |
description | By defining a new measure to community structure, exclusive modularity, and based on cavity method of statistical physics, we develop a mathematically principled method to determine the completeness of community structure, which represents whether a partition that is either annotated by experts or given by a community-detection algorithm, carries complete information about community structure in the network. Our results demonstrate that the expert partition is surprisingly incomplete in some networks such as the famous political blogs network, indicating that the relation between meta-data and community structure in real-world networks needs to be re-examined. As a byproduct we find that the exclusive modularity, which introduces a null model based on the degree-corrected stochastic block model, is of independent interest. We discuss its applications as principled ways of detecting hidden structures, finding hierarchical structures without removing edges, and obtaining low-dimensional embedding of networks. |
format | Online Article Text |
id | pubmed-5509661 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-55096612017-07-14 Completeness of Community Structure in Networks Xie, Jia-Rong Zhang, Pan Zhang, Hai-Feng Wang, Bing-Hong Sci Rep Article By defining a new measure to community structure, exclusive modularity, and based on cavity method of statistical physics, we develop a mathematically principled method to determine the completeness of community structure, which represents whether a partition that is either annotated by experts or given by a community-detection algorithm, carries complete information about community structure in the network. Our results demonstrate that the expert partition is surprisingly incomplete in some networks such as the famous political blogs network, indicating that the relation between meta-data and community structure in real-world networks needs to be re-examined. As a byproduct we find that the exclusive modularity, which introduces a null model based on the degree-corrected stochastic block model, is of independent interest. We discuss its applications as principled ways of detecting hidden structures, finding hierarchical structures without removing edges, and obtaining low-dimensional embedding of networks. Nature Publishing Group UK 2017-07-13 /pmc/articles/PMC5509661/ /pubmed/28706197 http://dx.doi.org/10.1038/s41598-017-05585-6 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Xie, Jia-Rong Zhang, Pan Zhang, Hai-Feng Wang, Bing-Hong Completeness of Community Structure in Networks |
title | Completeness of Community Structure in Networks |
title_full | Completeness of Community Structure in Networks |
title_fullStr | Completeness of Community Structure in Networks |
title_full_unstemmed | Completeness of Community Structure in Networks |
title_short | Completeness of Community Structure in Networks |
title_sort | completeness of community structure in networks |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5509661/ https://www.ncbi.nlm.nih.gov/pubmed/28706197 http://dx.doi.org/10.1038/s41598-017-05585-6 |
work_keys_str_mv | AT xiejiarong completenessofcommunitystructureinnetworks AT zhangpan completenessofcommunitystructureinnetworks AT zhanghaifeng completenessofcommunitystructureinnetworks AT wangbinghong completenessofcommunitystructureinnetworks |