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Halogen Bonding: A Powerful Tool for Modulation of Peptide Conformation
[Image: see text] Halogen bonding is a weak chemical force that has so far mostly found applications in crystal engineering. Despite its potential for use in drug discovery, as a new molecular tool in the direction of molecular recognition events, it has rarely been assessed in biopolymers. Motivate...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American
Chemical Society
2017
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5510091/ https://www.ncbi.nlm.nih.gov/pubmed/28581720 http://dx.doi.org/10.1021/acs.biochem.7b00429 |
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author | Danelius, Emma Andersson, Hanna Jarvoll, Patrik Lood, Kajsa Gräfenstein, Jürgen Erdélyi, Máté |
author_facet | Danelius, Emma Andersson, Hanna Jarvoll, Patrik Lood, Kajsa Gräfenstein, Jürgen Erdélyi, Máté |
author_sort | Danelius, Emma |
collection | PubMed |
description | [Image: see text] Halogen bonding is a weak chemical force that has so far mostly found applications in crystal engineering. Despite its potential for use in drug discovery, as a new molecular tool in the direction of molecular recognition events, it has rarely been assessed in biopolymers. Motivated by this fact, we have developed a peptide model system that permits the quantitative evaluation of weak forces in a biologically relevant proteinlike environment and have applied it for the assessment of a halogen bond formed between two amino acid side chains. The influence of a single weak force is measured by detection of the extent to which it modulates the conformation of a cooperatively folding system. We have optimized the amino acid sequence of the model peptide on analogues with a hydrogen bond-forming site as a model for the intramolecular halogen bond to be studied, demonstrating the ability of the technique to provide information about any type of weak secondary interaction. A combined solution nuclear magnetic resonance spectroscopic and computational investigation demonstrates that an interstrand halogen bond is capable of conformational stabilization of a β-hairpin foldamer comparable to an analogous hydrogen bond. This is the first report of incorporation of a conformation-stabilizing halogen bond into a peptide/protein system, and the first quantification of a chlorine-centered halogen bond in a biologically relevant system in solution. |
format | Online Article Text |
id | pubmed-5510091 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | American
Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-55100912017-07-18 Halogen Bonding: A Powerful Tool for Modulation of Peptide Conformation Danelius, Emma Andersson, Hanna Jarvoll, Patrik Lood, Kajsa Gräfenstein, Jürgen Erdélyi, Máté Biochemistry [Image: see text] Halogen bonding is a weak chemical force that has so far mostly found applications in crystal engineering. Despite its potential for use in drug discovery, as a new molecular tool in the direction of molecular recognition events, it has rarely been assessed in biopolymers. Motivated by this fact, we have developed a peptide model system that permits the quantitative evaluation of weak forces in a biologically relevant proteinlike environment and have applied it for the assessment of a halogen bond formed between two amino acid side chains. The influence of a single weak force is measured by detection of the extent to which it modulates the conformation of a cooperatively folding system. We have optimized the amino acid sequence of the model peptide on analogues with a hydrogen bond-forming site as a model for the intramolecular halogen bond to be studied, demonstrating the ability of the technique to provide information about any type of weak secondary interaction. A combined solution nuclear magnetic resonance spectroscopic and computational investigation demonstrates that an interstrand halogen bond is capable of conformational stabilization of a β-hairpin foldamer comparable to an analogous hydrogen bond. This is the first report of incorporation of a conformation-stabilizing halogen bond into a peptide/protein system, and the first quantification of a chlorine-centered halogen bond in a biologically relevant system in solution. American Chemical Society 2017-06-05 2017-06-27 /pmc/articles/PMC5510091/ /pubmed/28581720 http://dx.doi.org/10.1021/acs.biochem.7b00429 Text en Copyright © 2017 American Chemical Society This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes. |
spellingShingle | Danelius, Emma Andersson, Hanna Jarvoll, Patrik Lood, Kajsa Gräfenstein, Jürgen Erdélyi, Máté Halogen Bonding: A Powerful Tool for Modulation of Peptide Conformation |
title | Halogen Bonding: A Powerful Tool for Modulation of
Peptide Conformation |
title_full | Halogen Bonding: A Powerful Tool for Modulation of
Peptide Conformation |
title_fullStr | Halogen Bonding: A Powerful Tool for Modulation of
Peptide Conformation |
title_full_unstemmed | Halogen Bonding: A Powerful Tool for Modulation of
Peptide Conformation |
title_short | Halogen Bonding: A Powerful Tool for Modulation of
Peptide Conformation |
title_sort | halogen bonding: a powerful tool for modulation of
peptide conformation |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5510091/ https://www.ncbi.nlm.nih.gov/pubmed/28581720 http://dx.doi.org/10.1021/acs.biochem.7b00429 |
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