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The effects of high concentrations of ionic liquid on GB1 protein structure and dynamics probed by high-resolution magic-angle-spinning NMR spectroscopy

Ionic liquids have great potential in biological applications and biocatalysis, as some ionic liquids can stabilize proteins and enhance enzyme activity, while others have the opposite effect. However, on the molecular level, probing ionic liquid interactions with proteins, especially in solutions c...

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Detalles Bibliográficos
Autores principales: Warner, Lisa, Gjersing, Erica, Follett, Shelby E., Elliott, K. Wade, Dzyuba, Sergei V., Varga, Krisztina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5510950/
https://www.ncbi.nlm.nih.gov/pubmed/28717785
http://dx.doi.org/10.1016/j.bbrep.2016.08.009
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author Warner, Lisa
Gjersing, Erica
Follett, Shelby E.
Elliott, K. Wade
Dzyuba, Sergei V.
Varga, Krisztina
author_facet Warner, Lisa
Gjersing, Erica
Follett, Shelby E.
Elliott, K. Wade
Dzyuba, Sergei V.
Varga, Krisztina
author_sort Warner, Lisa
collection PubMed
description Ionic liquids have great potential in biological applications and biocatalysis, as some ionic liquids can stabilize proteins and enhance enzyme activity, while others have the opposite effect. However, on the molecular level, probing ionic liquid interactions with proteins, especially in solutions containing high concentrations of ionic liquids, has been challenging. In the present work the (13)C, (15)N-enriched GB1 model protein was used to demonstrate applicability of high-resolution magic-angle-spinning (HR-MAS) NMR spectroscopy to investigate ionic liquid–protein interactions. Effect of an ionic liquid (1-butyl-3-methylimidazolium bromide, [C(4)-mim]Br) on GB1was studied over a wide range of the ionic liquid concentrations (0.6–3.5 M, which corresponds to 10–60% v/v). Interactions between GB1 and [C(4)-mim]Br were observed from changes in the chemical shifts of the protein backbone as well as the changes in (15)N ps-ns dynamics and rotational correlation times. Site-specific interactions between the protein and [C(4)-mim]Br were assigned using 3D methods under HR-MAS conditions. Thus, HR-MAS NMR is a viable tool that could aid in elucidation of molecular mechanisms of ionic liquid–protein interactions.
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spelling pubmed-55109502017-09-27 The effects of high concentrations of ionic liquid on GB1 protein structure and dynamics probed by high-resolution magic-angle-spinning NMR spectroscopy Warner, Lisa Gjersing, Erica Follett, Shelby E. Elliott, K. Wade Dzyuba, Sergei V. Varga, Krisztina Biochem Biophys Rep Research Article Ionic liquids have great potential in biological applications and biocatalysis, as some ionic liquids can stabilize proteins and enhance enzyme activity, while others have the opposite effect. However, on the molecular level, probing ionic liquid interactions with proteins, especially in solutions containing high concentrations of ionic liquids, has been challenging. In the present work the (13)C, (15)N-enriched GB1 model protein was used to demonstrate applicability of high-resolution magic-angle-spinning (HR-MAS) NMR spectroscopy to investigate ionic liquid–protein interactions. Effect of an ionic liquid (1-butyl-3-methylimidazolium bromide, [C(4)-mim]Br) on GB1was studied over a wide range of the ionic liquid concentrations (0.6–3.5 M, which corresponds to 10–60% v/v). Interactions between GB1 and [C(4)-mim]Br were observed from changes in the chemical shifts of the protein backbone as well as the changes in (15)N ps-ns dynamics and rotational correlation times. Site-specific interactions between the protein and [C(4)-mim]Br were assigned using 3D methods under HR-MAS conditions. Thus, HR-MAS NMR is a viable tool that could aid in elucidation of molecular mechanisms of ionic liquid–protein interactions. Elsevier 2016-08-11 /pmc/articles/PMC5510950/ /pubmed/28717785 http://dx.doi.org/10.1016/j.bbrep.2016.08.009 Text en http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Article
Warner, Lisa
Gjersing, Erica
Follett, Shelby E.
Elliott, K. Wade
Dzyuba, Sergei V.
Varga, Krisztina
The effects of high concentrations of ionic liquid on GB1 protein structure and dynamics probed by high-resolution magic-angle-spinning NMR spectroscopy
title The effects of high concentrations of ionic liquid on GB1 protein structure and dynamics probed by high-resolution magic-angle-spinning NMR spectroscopy
title_full The effects of high concentrations of ionic liquid on GB1 protein structure and dynamics probed by high-resolution magic-angle-spinning NMR spectroscopy
title_fullStr The effects of high concentrations of ionic liquid on GB1 protein structure and dynamics probed by high-resolution magic-angle-spinning NMR spectroscopy
title_full_unstemmed The effects of high concentrations of ionic liquid on GB1 protein structure and dynamics probed by high-resolution magic-angle-spinning NMR spectroscopy
title_short The effects of high concentrations of ionic liquid on GB1 protein structure and dynamics probed by high-resolution magic-angle-spinning NMR spectroscopy
title_sort effects of high concentrations of ionic liquid on gb1 protein structure and dynamics probed by high-resolution magic-angle-spinning nmr spectroscopy
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5510950/
https://www.ncbi.nlm.nih.gov/pubmed/28717785
http://dx.doi.org/10.1016/j.bbrep.2016.08.009
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