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Genetic variation of root angle distribution in rice (Oryza sativa L.) seedlings
We developed a new method of using seedling trays to evaluate root angle distribution in rice (Oryza sativa. L), and found a wide genetic variation among cultivars. The seedling tray method can be used to evaluate in detail the growth angles of rice crown roots at the seedling stage by allocating ni...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Japanese Society of Breeding
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5515312/ https://www.ncbi.nlm.nih.gov/pubmed/28744171 http://dx.doi.org/10.1270/jsbbs.16185 |
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author | Tomita, Asami Sato, Tadashi Uga, Yusaku Obara, Mitsuhiro Fukuta, Yoshimichi |
author_facet | Tomita, Asami Sato, Tadashi Uga, Yusaku Obara, Mitsuhiro Fukuta, Yoshimichi |
author_sort | Tomita, Asami |
collection | PubMed |
description | We developed a new method of using seedling trays to evaluate root angle distribution in rice (Oryza sativa. L), and found a wide genetic variation among cultivars. The seedling tray method can be used to evaluate in detail the growth angles of rice crown roots at the seedling stage by allocating nine scores (10° to 90°). Unlike basket methods, it can handle large plant populations over a short growth period (only 14 days). By using the method, we characterized the root angle distributions of 97 accessions into two cluster groups: A and B. The numbers of accessions in group A were limited, and these were categorized as shallow rooting types including soil-surface root. Group B included from shallow to deep rooting types; both included Indica and Japonica Group cultivars, lowland and upland cultivars, and landraces and improved types. No relationship between variation in root vertical angle and total root number was found. The variation in root angle distribution was not related to differentiation between the Japonica and Indica Groups, among ecosystems used for rice cultivation, or among degrees of genetic improvement. The new evaluation method and associated information on genetic variation of rice accessions will be useful in root architecture breeding of rice. |
format | Online Article Text |
id | pubmed-5515312 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Japanese Society of Breeding |
record_format | MEDLINE/PubMed |
spelling | pubmed-55153122017-07-25 Genetic variation of root angle distribution in rice (Oryza sativa L.) seedlings Tomita, Asami Sato, Tadashi Uga, Yusaku Obara, Mitsuhiro Fukuta, Yoshimichi Breed Sci Research Paper We developed a new method of using seedling trays to evaluate root angle distribution in rice (Oryza sativa. L), and found a wide genetic variation among cultivars. The seedling tray method can be used to evaluate in detail the growth angles of rice crown roots at the seedling stage by allocating nine scores (10° to 90°). Unlike basket methods, it can handle large plant populations over a short growth period (only 14 days). By using the method, we characterized the root angle distributions of 97 accessions into two cluster groups: A and B. The numbers of accessions in group A were limited, and these were categorized as shallow rooting types including soil-surface root. Group B included from shallow to deep rooting types; both included Indica and Japonica Group cultivars, lowland and upland cultivars, and landraces and improved types. No relationship between variation in root vertical angle and total root number was found. The variation in root angle distribution was not related to differentiation between the Japonica and Indica Groups, among ecosystems used for rice cultivation, or among degrees of genetic improvement. The new evaluation method and associated information on genetic variation of rice accessions will be useful in root architecture breeding of rice. Japanese Society of Breeding 2017-06 2017-05-10 /pmc/articles/PMC5515312/ /pubmed/28744171 http://dx.doi.org/10.1270/jsbbs.16185 Text en Copyright © 2017 by JAPANESE SOCIETY OF BREEDING http://creativecommons.org/licenses/by-nc-nd/3.0 This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Paper Tomita, Asami Sato, Tadashi Uga, Yusaku Obara, Mitsuhiro Fukuta, Yoshimichi Genetic variation of root angle distribution in rice (Oryza sativa L.) seedlings |
title | Genetic variation of root angle distribution in rice (Oryza sativa L.) seedlings |
title_full | Genetic variation of root angle distribution in rice (Oryza sativa L.) seedlings |
title_fullStr | Genetic variation of root angle distribution in rice (Oryza sativa L.) seedlings |
title_full_unstemmed | Genetic variation of root angle distribution in rice (Oryza sativa L.) seedlings |
title_short | Genetic variation of root angle distribution in rice (Oryza sativa L.) seedlings |
title_sort | genetic variation of root angle distribution in rice (oryza sativa l.) seedlings |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5515312/ https://www.ncbi.nlm.nih.gov/pubmed/28744171 http://dx.doi.org/10.1270/jsbbs.16185 |
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