An ontology for cell types

We describe an ontology for cell types that covers the prokaryotic, fungal, animal and plant worlds. It includes over 680 cell types. These cell types are classified under several generic categories and are organized as a directed acyclic graph. The ontology is available in the formats adopted by th...

Descripción completa

Detalles Bibliográficos
Autores principales: Bard, Jonathan, Rhee, Seung Y, Ashburner, Michael
Formato: Texto
Lenguaje:English
Publicado: BioMed Central 2005
Materias:
Method
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC551541/
https://www.ncbi.nlm.nih.gov/pubmed/15693950
http://dx.doi.org/10.1186/gb-2005-6-2-r21
_version_ 1782122463919865856
author Bard, Jonathan
Rhee, Seung Y
Ashburner, Michael
author_facet Bard, Jonathan
Rhee, Seung Y
Ashburner, Michael
author_sort Bard, Jonathan
collection PubMed
description We describe an ontology for cell types that covers the prokaryotic, fungal, animal and plant worlds. It includes over 680 cell types. These cell types are classified under several generic categories and are organized as a directed acyclic graph. The ontology is available in the formats adopted by the Open Biological Ontologies umbrella and is designed to be used in the context of model organism genome and other biological databases. The ontology is freely available at and can be viewed using standard ontology visualization tools such as OBO-Edit and COBrA.
format Text
id pubmed-551541
institution National Center for Biotechnology Information
language English
publishDate 2005
publisher BioMed Central
record_format MEDLINE/PubMed
spelling pubmed-5515412005-03-03 An ontology for cell types Bard, Jonathan Rhee, Seung Y Ashburner, Michael Genome Biol Method We describe an ontology for cell types that covers the prokaryotic, fungal, animal and plant worlds. It includes over 680 cell types. These cell types are classified under several generic categories and are organized as a directed acyclic graph. The ontology is available in the formats adopted by the Open Biological Ontologies umbrella and is designed to be used in the context of model organism genome and other biological databases. The ontology is freely available at and can be viewed using standard ontology visualization tools such as OBO-Edit and COBrA. BioMed Central 2005 2005-01-14 /pmc/articles/PMC551541/ /pubmed/15693950 http://dx.doi.org/10.1186/gb-2005-6-2-r21 Text en Copyright © 2005 Bard et al.; licensee BioMed Central Ltd.
spellingShingle Method
Bard, Jonathan
Rhee, Seung Y
Ashburner, Michael
An ontology for cell types
title An ontology for cell types
title_full An ontology for cell types
title_fullStr An ontology for cell types
title_full_unstemmed An ontology for cell types
title_short An ontology for cell types
title_sort ontology for cell types
topic Method
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC551541/
https://www.ncbi.nlm.nih.gov/pubmed/15693950
http://dx.doi.org/10.1186/gb-2005-6-2-r21
work_keys_str_mv AT bardjonathan anontologyforcelltypes
AT rheeseungy anontologyforcelltypes
AT ashburnermichael anontologyforcelltypes
AT bardjonathan ontologyforcelltypes
AT rheeseungy ontologyforcelltypes
AT ashburnermichael ontologyforcelltypes

Ejemplares similares