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Taxa-area relationship of aquatic fungi on deciduous leaves
One of the fundamental patterns in macroecology is the increase in the number of observed taxa with size of sampled area. For microbes, the shape of this relationship remains less clear. The current study assessed the diversity of aquatic fungi, by the traditional approach based on conidial morpholo...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5515451/ https://www.ncbi.nlm.nih.gov/pubmed/28719634 http://dx.doi.org/10.1371/journal.pone.0181545 |
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author | Duarte, Sofia Cássio, Fernanda Pascoal, Cláudia Bärlocher, Felix |
author_facet | Duarte, Sofia Cássio, Fernanda Pascoal, Cláudia Bärlocher, Felix |
author_sort | Duarte, Sofia |
collection | PubMed |
description | One of the fundamental patterns in macroecology is the increase in the number of observed taxa with size of sampled area. For microbes, the shape of this relationship remains less clear. The current study assessed the diversity of aquatic fungi, by the traditional approach based on conidial morphology (captures reproducing aquatic hyphomycetes) and next generation sequencing (NGS; captures other fungi as well), on graded sizes of alder leaves (0.6 to 13.6 cm(2)). Leaves were submerged in two streams in geographically distant locations: the Oliveira Stream in Portugal and the Boss Brook in Canada. Decay rates of alder leaves and fungal sporulation rates did not differ between streams. Fungal biomass was higher in Boss Brook than in Oliveira Stream, and in both streams almost 100% of the reads belonged to active fungal taxa. In general, larger leaf areas tended to harbour more fungi, but these findings were not consistent between techniques. Morphospecies-based diversity increased with leaf area in Boss Brook, but not in Oliveira Stream; metabarcoding data showed an opposite trend. The higher resolution of metabarcoding resulted in steeper taxa-accumulation curves than morphospecies-based assessments (fungal conidia morphology). Fungal communities assessed by metabarcoding were spatially structured by leaf area in both streams. Metabarcoding promises greater resolution to assess biodiversity patterns in aquatic fungi and may be more accurate for assessing taxa-area relationships and local to global diversity ratios. |
format | Online Article Text |
id | pubmed-5515451 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-55154512017-08-07 Taxa-area relationship of aquatic fungi on deciduous leaves Duarte, Sofia Cássio, Fernanda Pascoal, Cláudia Bärlocher, Felix PLoS One Research Article One of the fundamental patterns in macroecology is the increase in the number of observed taxa with size of sampled area. For microbes, the shape of this relationship remains less clear. The current study assessed the diversity of aquatic fungi, by the traditional approach based on conidial morphology (captures reproducing aquatic hyphomycetes) and next generation sequencing (NGS; captures other fungi as well), on graded sizes of alder leaves (0.6 to 13.6 cm(2)). Leaves were submerged in two streams in geographically distant locations: the Oliveira Stream in Portugal and the Boss Brook in Canada. Decay rates of alder leaves and fungal sporulation rates did not differ between streams. Fungal biomass was higher in Boss Brook than in Oliveira Stream, and in both streams almost 100% of the reads belonged to active fungal taxa. In general, larger leaf areas tended to harbour more fungi, but these findings were not consistent between techniques. Morphospecies-based diversity increased with leaf area in Boss Brook, but not in Oliveira Stream; metabarcoding data showed an opposite trend. The higher resolution of metabarcoding resulted in steeper taxa-accumulation curves than morphospecies-based assessments (fungal conidia morphology). Fungal communities assessed by metabarcoding were spatially structured by leaf area in both streams. Metabarcoding promises greater resolution to assess biodiversity patterns in aquatic fungi and may be more accurate for assessing taxa-area relationships and local to global diversity ratios. Public Library of Science 2017-07-18 /pmc/articles/PMC5515451/ /pubmed/28719634 http://dx.doi.org/10.1371/journal.pone.0181545 Text en © 2017 Duarte et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Duarte, Sofia Cássio, Fernanda Pascoal, Cláudia Bärlocher, Felix Taxa-area relationship of aquatic fungi on deciduous leaves |
title | Taxa-area relationship of aquatic fungi on deciduous leaves |
title_full | Taxa-area relationship of aquatic fungi on deciduous leaves |
title_fullStr | Taxa-area relationship of aquatic fungi on deciduous leaves |
title_full_unstemmed | Taxa-area relationship of aquatic fungi on deciduous leaves |
title_short | Taxa-area relationship of aquatic fungi on deciduous leaves |
title_sort | taxa-area relationship of aquatic fungi on deciduous leaves |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5515451/ https://www.ncbi.nlm.nih.gov/pubmed/28719634 http://dx.doi.org/10.1371/journal.pone.0181545 |
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