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A very simple, re-executable neuroimaging publication
Reproducible research is a key element of the scientific process. Re-executability of neuroimaging workflows that lead to the conclusions arrived at in the literature has not yet been sufficiently addressed and adopted by the neuroimaging community. In this paper, we document a set of procedures, wh...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
F1000Research
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5516225/ https://www.ncbi.nlm.nih.gov/pubmed/28781753 http://dx.doi.org/10.12688/f1000research.10783.2 |
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author | Ghosh, Satrajit S. Poline, Jean-Baptiste Keator, David B. Halchenko, Yaroslav O. Thomas, Adam G. Kessler, Daniel A. Kennedy, David N. |
author_facet | Ghosh, Satrajit S. Poline, Jean-Baptiste Keator, David B. Halchenko, Yaroslav O. Thomas, Adam G. Kessler, Daniel A. Kennedy, David N. |
author_sort | Ghosh, Satrajit S. |
collection | PubMed |
description | Reproducible research is a key element of the scientific process. Re-executability of neuroimaging workflows that lead to the conclusions arrived at in the literature has not yet been sufficiently addressed and adopted by the neuroimaging community. In this paper, we document a set of procedures, which include supplemental additions to a manuscript, that unambiguously define the data, workflow, execution environment and results of a neuroimaging analysis, in order to generate a verifiable re-executable publication. Re-executability provides a starting point for examination of the generalizability and reproducibility of a given finding. |
format | Online Article Text |
id | pubmed-5516225 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | F1000Research |
record_format | MEDLINE/PubMed |
spelling | pubmed-55162252017-08-04 A very simple, re-executable neuroimaging publication Ghosh, Satrajit S. Poline, Jean-Baptiste Keator, David B. Halchenko, Yaroslav O. Thomas, Adam G. Kessler, Daniel A. Kennedy, David N. F1000Res Method Article Reproducible research is a key element of the scientific process. Re-executability of neuroimaging workflows that lead to the conclusions arrived at in the literature has not yet been sufficiently addressed and adopted by the neuroimaging community. In this paper, we document a set of procedures, which include supplemental additions to a manuscript, that unambiguously define the data, workflow, execution environment and results of a neuroimaging analysis, in order to generate a verifiable re-executable publication. Re-executability provides a starting point for examination of the generalizability and reproducibility of a given finding. F1000Research 2017-06-15 /pmc/articles/PMC5516225/ /pubmed/28781753 http://dx.doi.org/10.12688/f1000research.10783.2 Text en Copyright: © 2017 Ghosh SS et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Method Article Ghosh, Satrajit S. Poline, Jean-Baptiste Keator, David B. Halchenko, Yaroslav O. Thomas, Adam G. Kessler, Daniel A. Kennedy, David N. A very simple, re-executable neuroimaging publication |
title | A very simple, re-executable neuroimaging publication |
title_full | A very simple, re-executable neuroimaging publication |
title_fullStr | A very simple, re-executable neuroimaging publication |
title_full_unstemmed | A very simple, re-executable neuroimaging publication |
title_short | A very simple, re-executable neuroimaging publication |
title_sort | very simple, re-executable neuroimaging publication |
topic | Method Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5516225/ https://www.ncbi.nlm.nih.gov/pubmed/28781753 http://dx.doi.org/10.12688/f1000research.10783.2 |
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