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Engineering glucose metabolism of Escherichia coli under nitrogen starvation

A major aspect of microbial metabolic engineering is the development of chassis hosts that have favorable global metabolic phenotypes, and can be further engineered to produce a variety of compounds. In this work, we focus on the problem of decoupling growth and production in the model bacterium Esc...

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Autores principales: Chubukov, Victor, Desmarais, John James, Wang, George, Chan, Leanne Jade G, Baidoo, Edward EK, Petzold, Christopher J, Keasling, Jay D, Mukhopadhyay, Aindrila
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5516864/
https://www.ncbi.nlm.nih.gov/pubmed/28725483
http://dx.doi.org/10.1038/npjsba.2016.35
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author Chubukov, Victor
Desmarais, John James
Wang, George
Chan, Leanne Jade G
Baidoo, Edward EK
Petzold, Christopher J
Keasling, Jay D
Mukhopadhyay, Aindrila
author_facet Chubukov, Victor
Desmarais, John James
Wang, George
Chan, Leanne Jade G
Baidoo, Edward EK
Petzold, Christopher J
Keasling, Jay D
Mukhopadhyay, Aindrila
author_sort Chubukov, Victor
collection PubMed
description A major aspect of microbial metabolic engineering is the development of chassis hosts that have favorable global metabolic phenotypes, and can be further engineered to produce a variety of compounds. In this work, we focus on the problem of decoupling growth and production in the model bacterium Escherichia coli, and in particular on the maintenance of active metabolism during nitrogen-limited stationary phase. We find that by overexpressing the enzyme PtsI, a component of the glucose uptake system that is inhibited by α-ketoglutarate during nitrogen limitation, we are able to achieve a fourfold increase in metabolic rates. Alternative systems were also tested: chimeric PtsI proteins hypothesized to be insensitive to α-ketoglutarate did not improve metabolic rates under the conditions tested, whereas systems based on the galactose permease GalP suffered from energy stress and extreme sensitivity to expression level. Overexpression of PtsI is likely to be a useful arrow in the metabolic engineer’s quiver as productivity of engineered pathways becomes limited by central metabolic rates during stationary phase production processes.
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spelling pubmed-55168642017-07-19 Engineering glucose metabolism of Escherichia coli under nitrogen starvation Chubukov, Victor Desmarais, John James Wang, George Chan, Leanne Jade G Baidoo, Edward EK Petzold, Christopher J Keasling, Jay D Mukhopadhyay, Aindrila NPJ Syst Biol Appl Article A major aspect of microbial metabolic engineering is the development of chassis hosts that have favorable global metabolic phenotypes, and can be further engineered to produce a variety of compounds. In this work, we focus on the problem of decoupling growth and production in the model bacterium Escherichia coli, and in particular on the maintenance of active metabolism during nitrogen-limited stationary phase. We find that by overexpressing the enzyme PtsI, a component of the glucose uptake system that is inhibited by α-ketoglutarate during nitrogen limitation, we are able to achieve a fourfold increase in metabolic rates. Alternative systems were also tested: chimeric PtsI proteins hypothesized to be insensitive to α-ketoglutarate did not improve metabolic rates under the conditions tested, whereas systems based on the galactose permease GalP suffered from energy stress and extreme sensitivity to expression level. Overexpression of PtsI is likely to be a useful arrow in the metabolic engineer’s quiver as productivity of engineered pathways becomes limited by central metabolic rates during stationary phase production processes. Nature Publishing Group 2017-01-05 /pmc/articles/PMC5516864/ /pubmed/28725483 http://dx.doi.org/10.1038/npjsba.2016.35 Text en Copyright © 2017 The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Chubukov, Victor
Desmarais, John James
Wang, George
Chan, Leanne Jade G
Baidoo, Edward EK
Petzold, Christopher J
Keasling, Jay D
Mukhopadhyay, Aindrila
Engineering glucose metabolism of Escherichia coli under nitrogen starvation
title Engineering glucose metabolism of Escherichia coli under nitrogen starvation
title_full Engineering glucose metabolism of Escherichia coli under nitrogen starvation
title_fullStr Engineering glucose metabolism of Escherichia coli under nitrogen starvation
title_full_unstemmed Engineering glucose metabolism of Escherichia coli under nitrogen starvation
title_short Engineering glucose metabolism of Escherichia coli under nitrogen starvation
title_sort engineering glucose metabolism of escherichia coli under nitrogen starvation
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5516864/
https://www.ncbi.nlm.nih.gov/pubmed/28725483
http://dx.doi.org/10.1038/npjsba.2016.35
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