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Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows

BACKGROUND: Predicting progression from a stage of Mild Cognitive Impairment to dementia is a major pursuit in current research. It is broadly accepted that cognition declines with a continuum between MCI and dementia. As such, cohorts of MCI patients are usually heterogeneous, containing patients a...

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Autores principales: Pereira, Telma, Lemos, Luís, Cardoso, Sandra, Silva, Dina, Rodrigues, Ana, Santana, Isabel, de Mendonça, Alexandre, Guerreiro, Manuela, Madeira, Sara C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5517828/
https://www.ncbi.nlm.nih.gov/pubmed/28724366
http://dx.doi.org/10.1186/s12911-017-0497-2
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author Pereira, Telma
Lemos, Luís
Cardoso, Sandra
Silva, Dina
Rodrigues, Ana
Santana, Isabel
de Mendonça, Alexandre
Guerreiro, Manuela
Madeira, Sara C.
author_facet Pereira, Telma
Lemos, Luís
Cardoso, Sandra
Silva, Dina
Rodrigues, Ana
Santana, Isabel
de Mendonça, Alexandre
Guerreiro, Manuela
Madeira, Sara C.
author_sort Pereira, Telma
collection PubMed
description BACKGROUND: Predicting progression from a stage of Mild Cognitive Impairment to dementia is a major pursuit in current research. It is broadly accepted that cognition declines with a continuum between MCI and dementia. As such, cohorts of MCI patients are usually heterogeneous, containing patients at different stages of the neurodegenerative process. This hampers the prognostic task. Nevertheless, when learning prognostic models, most studies use the entire cohort of MCI patients regardless of their disease stages. In this paper, we propose a Time Windows approach to predict conversion to dementia, learning with patients stratified using time windows, thus fine-tuning the prognosis regarding the time to conversion. METHODS: In the proposed Time Windows approach, we grouped patients based on the clinical information of whether they converted (converter MCI) or remained MCI (stable MCI) within a specific time window. We tested time windows of 2, 3, 4 and 5 years. We developed a prognostic model for each time window using clinical and neuropsychological data and compared this approach with the commonly used in the literature, where all patients are used to learn the models, named as First Last approach. This enables to move from the traditional question “Will a MCI patient convert to dementia somewhere in the future” to the question “Will a MCI patient convert to dementia in a specific time window”. RESULTS: The proposed Time Windows approach outperformed the First Last approach. The results showed that we can predict conversion to dementia as early as 5 years before the event with an AUC of 0.88 in the cross-validation set and 0.76 in an independent validation set. CONCLUSIONS: Prognostic models using time windows have higher performance when predicting progression from MCI to dementia, when compared to the prognostic approach commonly used in the literature. Furthermore, the proposed Time Windows approach is more relevant from a clinical point of view, predicting conversion within a temporal interval rather than sometime in the future and allowing clinicians to timely adjust treatments and clinical appointments. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12911-017-0497-2) contains supplementary material, which is available to authorized users.
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spelling pubmed-55178282017-08-16 Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows Pereira, Telma Lemos, Luís Cardoso, Sandra Silva, Dina Rodrigues, Ana Santana, Isabel de Mendonça, Alexandre Guerreiro, Manuela Madeira, Sara C. BMC Med Inform Decis Mak Research Article BACKGROUND: Predicting progression from a stage of Mild Cognitive Impairment to dementia is a major pursuit in current research. It is broadly accepted that cognition declines with a continuum between MCI and dementia. As such, cohorts of MCI patients are usually heterogeneous, containing patients at different stages of the neurodegenerative process. This hampers the prognostic task. Nevertheless, when learning prognostic models, most studies use the entire cohort of MCI patients regardless of their disease stages. In this paper, we propose a Time Windows approach to predict conversion to dementia, learning with patients stratified using time windows, thus fine-tuning the prognosis regarding the time to conversion. METHODS: In the proposed Time Windows approach, we grouped patients based on the clinical information of whether they converted (converter MCI) or remained MCI (stable MCI) within a specific time window. We tested time windows of 2, 3, 4 and 5 years. We developed a prognostic model for each time window using clinical and neuropsychological data and compared this approach with the commonly used in the literature, where all patients are used to learn the models, named as First Last approach. This enables to move from the traditional question “Will a MCI patient convert to dementia somewhere in the future” to the question “Will a MCI patient convert to dementia in a specific time window”. RESULTS: The proposed Time Windows approach outperformed the First Last approach. The results showed that we can predict conversion to dementia as early as 5 years before the event with an AUC of 0.88 in the cross-validation set and 0.76 in an independent validation set. CONCLUSIONS: Prognostic models using time windows have higher performance when predicting progression from MCI to dementia, when compared to the prognostic approach commonly used in the literature. Furthermore, the proposed Time Windows approach is more relevant from a clinical point of view, predicting conversion within a temporal interval rather than sometime in the future and allowing clinicians to timely adjust treatments and clinical appointments. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12911-017-0497-2) contains supplementary material, which is available to authorized users. BioMed Central 2017-07-19 /pmc/articles/PMC5517828/ /pubmed/28724366 http://dx.doi.org/10.1186/s12911-017-0497-2 Text en © The Author(s). 2017 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Pereira, Telma
Lemos, Luís
Cardoso, Sandra
Silva, Dina
Rodrigues, Ana
Santana, Isabel
de Mendonça, Alexandre
Guerreiro, Manuela
Madeira, Sara C.
Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows
title Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows
title_full Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows
title_fullStr Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows
title_full_unstemmed Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows
title_short Predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows
title_sort predicting progression of mild cognitive impairment to dementia using neuropsychological data: a supervised learning approach using time windows
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5517828/
https://www.ncbi.nlm.nih.gov/pubmed/28724366
http://dx.doi.org/10.1186/s12911-017-0497-2
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