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Sequencing of DICER1 in sarcomas identifies biallelic somatic DICER1 mutations in an adult-onset embryonal rhabdomyosarcoma

BACKGROUND: Sarcomas are rare and heterogeneous cancers. We assessed the contribution of DICER1 mutations to sarcoma development. METHODS: The coding region of DICER1 was sequenced in 67 sarcomas using a custom Fluidigm Access Array. The RNase III domains were Sanger sequenced in six additional sarc...

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Autores principales: de Kock, Leanne, Rivera, Barbara, Revil, Timothée, Thorner, Paul, Goudie, Catherine, Bouron-Dal Soglio, Dorothée, Choong, Catherine S, Priest, John R, van Diest, Paul J, Tanboon, Jantima, Wagner, Anja, Ragoussis, Jiannis, Choong, Peter FM, Foulkes, William D
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5518865/
https://www.ncbi.nlm.nih.gov/pubmed/28524158
http://dx.doi.org/10.1038/bjc.2017.147
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author de Kock, Leanne
Rivera, Barbara
Revil, Timothée
Thorner, Paul
Goudie, Catherine
Bouron-Dal Soglio, Dorothée
Choong, Catherine S
Priest, John R
van Diest, Paul J
Tanboon, Jantima
Wagner, Anja
Ragoussis, Jiannis
Choong, Peter FM
Foulkes, William D
author_facet de Kock, Leanne
Rivera, Barbara
Revil, Timothée
Thorner, Paul
Goudie, Catherine
Bouron-Dal Soglio, Dorothée
Choong, Catherine S
Priest, John R
van Diest, Paul J
Tanboon, Jantima
Wagner, Anja
Ragoussis, Jiannis
Choong, Peter FM
Foulkes, William D
author_sort de Kock, Leanne
collection PubMed
description BACKGROUND: Sarcomas are rare and heterogeneous cancers. We assessed the contribution of DICER1 mutations to sarcoma development. METHODS: The coding region of DICER1 was sequenced in 67 sarcomas using a custom Fluidigm Access Array. The RNase III domains were Sanger sequenced in six additional sarcomas to identify hotspot DICER1 variants. RESULTS: The median age of sarcoma diagnosis was 45.7 years (range: 3 months to 87.4 years). A recurrent embryonal rhabdomyosarcoma (ERMS) of the broad ligament, first diagnosed at age 23 years, harboured biallelic pathogenic somatic DICER1 variants (1 truncating and 1 RNase IIIb missense). We identified nine other DICER1 variants. One somatic variant (p.L1070V) identified in a pleomorphic sarcoma and one germline variant (c.2257-7A>G) may be pathogenic, but the others are considered to be benign. CONCLUSIONS: We show that deleterious DICER1 mutations underlie the genetic basis of only a small fraction of sarcomas, in particular ERMS of the urogenital tract.
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spelling pubmed-55188652018-06-06 Sequencing of DICER1 in sarcomas identifies biallelic somatic DICER1 mutations in an adult-onset embryonal rhabdomyosarcoma de Kock, Leanne Rivera, Barbara Revil, Timothée Thorner, Paul Goudie, Catherine Bouron-Dal Soglio, Dorothée Choong, Catherine S Priest, John R van Diest, Paul J Tanboon, Jantima Wagner, Anja Ragoussis, Jiannis Choong, Peter FM Foulkes, William D Br J Cancer Genetics & Genomics BACKGROUND: Sarcomas are rare and heterogeneous cancers. We assessed the contribution of DICER1 mutations to sarcoma development. METHODS: The coding region of DICER1 was sequenced in 67 sarcomas using a custom Fluidigm Access Array. The RNase III domains were Sanger sequenced in six additional sarcomas to identify hotspot DICER1 variants. RESULTS: The median age of sarcoma diagnosis was 45.7 years (range: 3 months to 87.4 years). A recurrent embryonal rhabdomyosarcoma (ERMS) of the broad ligament, first diagnosed at age 23 years, harboured biallelic pathogenic somatic DICER1 variants (1 truncating and 1 RNase IIIb missense). We identified nine other DICER1 variants. One somatic variant (p.L1070V) identified in a pleomorphic sarcoma and one germline variant (c.2257-7A>G) may be pathogenic, but the others are considered to be benign. CONCLUSIONS: We show that deleterious DICER1 mutations underlie the genetic basis of only a small fraction of sarcomas, in particular ERMS of the urogenital tract. Nature Publishing Group 2017-06-06 2017-05-18 /pmc/articles/PMC5518865/ /pubmed/28524158 http://dx.doi.org/10.1038/bjc.2017.147 Text en Copyright © 2017 Cancer Research UK http://creativecommons.org/licenses/by-nc-sa/4.0/ From twelve months after its original publication, this work is licensed under the Creative Commons Attribution-NonCommercial-Share Alike 4.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/4.0/
spellingShingle Genetics & Genomics
de Kock, Leanne
Rivera, Barbara
Revil, Timothée
Thorner, Paul
Goudie, Catherine
Bouron-Dal Soglio, Dorothée
Choong, Catherine S
Priest, John R
van Diest, Paul J
Tanboon, Jantima
Wagner, Anja
Ragoussis, Jiannis
Choong, Peter FM
Foulkes, William D
Sequencing of DICER1 in sarcomas identifies biallelic somatic DICER1 mutations in an adult-onset embryonal rhabdomyosarcoma
title Sequencing of DICER1 in sarcomas identifies biallelic somatic DICER1 mutations in an adult-onset embryonal rhabdomyosarcoma
title_full Sequencing of DICER1 in sarcomas identifies biallelic somatic DICER1 mutations in an adult-onset embryonal rhabdomyosarcoma
title_fullStr Sequencing of DICER1 in sarcomas identifies biallelic somatic DICER1 mutations in an adult-onset embryonal rhabdomyosarcoma
title_full_unstemmed Sequencing of DICER1 in sarcomas identifies biallelic somatic DICER1 mutations in an adult-onset embryonal rhabdomyosarcoma
title_short Sequencing of DICER1 in sarcomas identifies biallelic somatic DICER1 mutations in an adult-onset embryonal rhabdomyosarcoma
title_sort sequencing of dicer1 in sarcomas identifies biallelic somatic dicer1 mutations in an adult-onset embryonal rhabdomyosarcoma
topic Genetics & Genomics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5518865/
https://www.ncbi.nlm.nih.gov/pubmed/28524158
http://dx.doi.org/10.1038/bjc.2017.147
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