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Structure of general-population antibody titer distributions to influenza A virus
Seroepidemiological studies aim to understand population-level exposure and immunity to infectious diseases. Their results are normally presented as binary outcomes describing the presence or absence of pathogen-specific antibody, despite the fact that many assays measure continuous quantities. A po...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5519701/ https://www.ncbi.nlm.nih.gov/pubmed/28729702 http://dx.doi.org/10.1038/s41598-017-06177-0 |
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author | Nhat, Nguyen Thi Duy Todd, Stacy de Bruin, Erwin Thao, Tran Thi Nhu Vy, Nguyen Ha Thao Quan, Tran Minh Vinh, Dao Nguyen van Beek, Janko Anh, Pham Hong Lam, Ha Minh Hung, Nguyen Thanh Thanh, Nguyen Thi Le Huy, Huynh Le Anh Ha, Vo Thi Hong Baker, Stephen Thwaites, Guy E. Lien, Nguyen Thi Nam Hong, Tran Thi Kim Farrar, Jeremy Simmons, Cameron P. Chau, Nguyen Van Vinh Koopmans, Marion Boni, Maciej F. |
author_facet | Nhat, Nguyen Thi Duy Todd, Stacy de Bruin, Erwin Thao, Tran Thi Nhu Vy, Nguyen Ha Thao Quan, Tran Minh Vinh, Dao Nguyen van Beek, Janko Anh, Pham Hong Lam, Ha Minh Hung, Nguyen Thanh Thanh, Nguyen Thi Le Huy, Huynh Le Anh Ha, Vo Thi Hong Baker, Stephen Thwaites, Guy E. Lien, Nguyen Thi Nam Hong, Tran Thi Kim Farrar, Jeremy Simmons, Cameron P. Chau, Nguyen Van Vinh Koopmans, Marion Boni, Maciej F. |
author_sort | Nhat, Nguyen Thi Duy |
collection | PubMed |
description | Seroepidemiological studies aim to understand population-level exposure and immunity to infectious diseases. Their results are normally presented as binary outcomes describing the presence or absence of pathogen-specific antibody, despite the fact that many assays measure continuous quantities. A population’s natural distribution of antibody titers to an endemic infectious disease may include information on multiple serological states – naiveté, recent infection, non-recent infection, childhood infection – depending on the disease in question and the acquisition and waning patterns of immunity. In this study, we investigate 20,152 general-population serum samples from southern Vietnam collected between 2009 and 2013 from which we report antibody titers to the influenza virus HA1 protein using a continuous titer measurement from a protein microarray assay. We describe the distributions of antibody titers to subtypes 2009 H1N1 and H3N2. Using a model selection approach to fit mixture distributions, we show that 2009 H1N1 antibody titers fall into four titer subgroups and that H3N2 titers fall into three subgroups. For H1N1, our interpretation is that the two highest-titer subgroups correspond to recent and historical infection, which is consistent with 2009 pandemic attack rates. Similar interpretations are available for H3N2, but right-censoring of titers makes these interpretations difficult to validate. |
format | Online Article Text |
id | pubmed-5519701 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-55197012017-07-26 Structure of general-population antibody titer distributions to influenza A virus Nhat, Nguyen Thi Duy Todd, Stacy de Bruin, Erwin Thao, Tran Thi Nhu Vy, Nguyen Ha Thao Quan, Tran Minh Vinh, Dao Nguyen van Beek, Janko Anh, Pham Hong Lam, Ha Minh Hung, Nguyen Thanh Thanh, Nguyen Thi Le Huy, Huynh Le Anh Ha, Vo Thi Hong Baker, Stephen Thwaites, Guy E. Lien, Nguyen Thi Nam Hong, Tran Thi Kim Farrar, Jeremy Simmons, Cameron P. Chau, Nguyen Van Vinh Koopmans, Marion Boni, Maciej F. Sci Rep Article Seroepidemiological studies aim to understand population-level exposure and immunity to infectious diseases. Their results are normally presented as binary outcomes describing the presence or absence of pathogen-specific antibody, despite the fact that many assays measure continuous quantities. A population’s natural distribution of antibody titers to an endemic infectious disease may include information on multiple serological states – naiveté, recent infection, non-recent infection, childhood infection – depending on the disease in question and the acquisition and waning patterns of immunity. In this study, we investigate 20,152 general-population serum samples from southern Vietnam collected between 2009 and 2013 from which we report antibody titers to the influenza virus HA1 protein using a continuous titer measurement from a protein microarray assay. We describe the distributions of antibody titers to subtypes 2009 H1N1 and H3N2. Using a model selection approach to fit mixture distributions, we show that 2009 H1N1 antibody titers fall into four titer subgroups and that H3N2 titers fall into three subgroups. For H1N1, our interpretation is that the two highest-titer subgroups correspond to recent and historical infection, which is consistent with 2009 pandemic attack rates. Similar interpretations are available for H3N2, but right-censoring of titers makes these interpretations difficult to validate. Nature Publishing Group UK 2017-07-20 /pmc/articles/PMC5519701/ /pubmed/28729702 http://dx.doi.org/10.1038/s41598-017-06177-0 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Nhat, Nguyen Thi Duy Todd, Stacy de Bruin, Erwin Thao, Tran Thi Nhu Vy, Nguyen Ha Thao Quan, Tran Minh Vinh, Dao Nguyen van Beek, Janko Anh, Pham Hong Lam, Ha Minh Hung, Nguyen Thanh Thanh, Nguyen Thi Le Huy, Huynh Le Anh Ha, Vo Thi Hong Baker, Stephen Thwaites, Guy E. Lien, Nguyen Thi Nam Hong, Tran Thi Kim Farrar, Jeremy Simmons, Cameron P. Chau, Nguyen Van Vinh Koopmans, Marion Boni, Maciej F. Structure of general-population antibody titer distributions to influenza A virus |
title | Structure of general-population antibody titer distributions to influenza A virus |
title_full | Structure of general-population antibody titer distributions to influenza A virus |
title_fullStr | Structure of general-population antibody titer distributions to influenza A virus |
title_full_unstemmed | Structure of general-population antibody titer distributions to influenza A virus |
title_short | Structure of general-population antibody titer distributions to influenza A virus |
title_sort | structure of general-population antibody titer distributions to influenza a virus |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5519701/ https://www.ncbi.nlm.nih.gov/pubmed/28729702 http://dx.doi.org/10.1038/s41598-017-06177-0 |
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