Cargando…
Prospective study of DNA methylation at chromosome 8q24 in peripheral blood and prostate cancer risk
BACKGROUND: Chromosome 8q24 has emerged as an important genetic susceptibility region for several cancers, including prostate cancer; however, little is known about the contribution of DNA methylation in this region to risk. METHODS: We prospectively evaluated DNA methylation at 8q24 in relation to...
Autores principales: | , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5520085/ https://www.ncbi.nlm.nih.gov/pubmed/28463958 http://dx.doi.org/10.1038/bjc.2017.104 |
_version_ | 1783251750551027712 |
---|---|
author | Barry, Kathryn Hughes Moore, Lee E Sampson, Joshua N Koutros, Stella Yan, Liying Meyer, Ann Reddy, Mahitha Oler, Andrew J Cook, Michael B Fraumeni Jr, Joseph F Yeager, Meredith Amundadottir, Laufey T Berndt, Sonja I |
author_facet | Barry, Kathryn Hughes Moore, Lee E Sampson, Joshua N Koutros, Stella Yan, Liying Meyer, Ann Reddy, Mahitha Oler, Andrew J Cook, Michael B Fraumeni Jr, Joseph F Yeager, Meredith Amundadottir, Laufey T Berndt, Sonja I |
author_sort | Barry, Kathryn Hughes |
collection | PubMed |
description | BACKGROUND: Chromosome 8q24 has emerged as an important genetic susceptibility region for several cancers, including prostate cancer; however, little is known about the contribution of DNA methylation in this region to risk. METHODS: We prospectively evaluated DNA methylation at 8q24 in relation to prostate cancer using pre-diagnostic blood samples from 694 prostate cancer cases (including 172 aggressive cases) and 703 controls in the Prostate, Lung, Colorectal and Ovarian Cancer Screening Trial. We used logistic regression to estimate odds ratios and 95% confidence intervals. RESULTS: Although none remained significant after adjustment for multiple testing (q>0.05), of the 50 CpG sites meeting quality control, we identified 8 sites that were nominally associated with prostate cancer (P(trend)<0.05), including 6 correlated (Spearman ρ: 0.20–0.52) sites in POU5F1B and 2 intergenic sites (most significant site: Chr8:128428897 in POU5F1B, P(trend)=0.01). We also identified two correlated (ρ=0.39) sites in MYC (Chr8:128753187 and Chr8:128753154) that were associated with aggressive (P(trend)=0.02 and 0.03), but not non-aggressive disease (P(trend)=0.70 and 0.20; P(heterogeneity)=0.01 and 4.6 × 10(−3)). These findings persisted after adjustment for the top 8q24 prostate cancer variants in our study. CONCLUSIONS: Although requiring replication, our findings provide some evidence that 8q24 DNA methylation levels may be associated with prostate cancer risk. |
format | Online Article Text |
id | pubmed-5520085 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-55200852018-05-23 Prospective study of DNA methylation at chromosome 8q24 in peripheral blood and prostate cancer risk Barry, Kathryn Hughes Moore, Lee E Sampson, Joshua N Koutros, Stella Yan, Liying Meyer, Ann Reddy, Mahitha Oler, Andrew J Cook, Michael B Fraumeni Jr, Joseph F Yeager, Meredith Amundadottir, Laufey T Berndt, Sonja I Br J Cancer Genetics & Genomics BACKGROUND: Chromosome 8q24 has emerged as an important genetic susceptibility region for several cancers, including prostate cancer; however, little is known about the contribution of DNA methylation in this region to risk. METHODS: We prospectively evaluated DNA methylation at 8q24 in relation to prostate cancer using pre-diagnostic blood samples from 694 prostate cancer cases (including 172 aggressive cases) and 703 controls in the Prostate, Lung, Colorectal and Ovarian Cancer Screening Trial. We used logistic regression to estimate odds ratios and 95% confidence intervals. RESULTS: Although none remained significant after adjustment for multiple testing (q>0.05), of the 50 CpG sites meeting quality control, we identified 8 sites that were nominally associated with prostate cancer (P(trend)<0.05), including 6 correlated (Spearman ρ: 0.20–0.52) sites in POU5F1B and 2 intergenic sites (most significant site: Chr8:128428897 in POU5F1B, P(trend)=0.01). We also identified two correlated (ρ=0.39) sites in MYC (Chr8:128753187 and Chr8:128753154) that were associated with aggressive (P(trend)=0.02 and 0.03), but not non-aggressive disease (P(trend)=0.70 and 0.20; P(heterogeneity)=0.01 and 4.6 × 10(−3)). These findings persisted after adjustment for the top 8q24 prostate cancer variants in our study. CONCLUSIONS: Although requiring replication, our findings provide some evidence that 8q24 DNA methylation levels may be associated with prostate cancer risk. Nature Publishing Group 2017-05-23 2017-05-02 /pmc/articles/PMC5520085/ /pubmed/28463958 http://dx.doi.org/10.1038/bjc.2017.104 Text en Copyright © 2017 Cancer Research UK http://creativecommons.org/licenses/by-nc-sa/4.0/ From twelve months after its original publication, this work is licensed under the Creative Commons Attribution-NonCommercial-Share Alike 4.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/4.0/ |
spellingShingle | Genetics & Genomics Barry, Kathryn Hughes Moore, Lee E Sampson, Joshua N Koutros, Stella Yan, Liying Meyer, Ann Reddy, Mahitha Oler, Andrew J Cook, Michael B Fraumeni Jr, Joseph F Yeager, Meredith Amundadottir, Laufey T Berndt, Sonja I Prospective study of DNA methylation at chromosome 8q24 in peripheral blood and prostate cancer risk |
title | Prospective study of DNA methylation at chromosome 8q24 in peripheral blood and prostate cancer risk |
title_full | Prospective study of DNA methylation at chromosome 8q24 in peripheral blood and prostate cancer risk |
title_fullStr | Prospective study of DNA methylation at chromosome 8q24 in peripheral blood and prostate cancer risk |
title_full_unstemmed | Prospective study of DNA methylation at chromosome 8q24 in peripheral blood and prostate cancer risk |
title_short | Prospective study of DNA methylation at chromosome 8q24 in peripheral blood and prostate cancer risk |
title_sort | prospective study of dna methylation at chromosome 8q24 in peripheral blood and prostate cancer risk |
topic | Genetics & Genomics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5520085/ https://www.ncbi.nlm.nih.gov/pubmed/28463958 http://dx.doi.org/10.1038/bjc.2017.104 |
work_keys_str_mv | AT barrykathrynhughes prospectivestudyofdnamethylationatchromosome8q24inperipheralbloodandprostatecancerrisk AT mooreleee prospectivestudyofdnamethylationatchromosome8q24inperipheralbloodandprostatecancerrisk AT sampsonjoshuan prospectivestudyofdnamethylationatchromosome8q24inperipheralbloodandprostatecancerrisk AT koutrosstella prospectivestudyofdnamethylationatchromosome8q24inperipheralbloodandprostatecancerrisk AT yanliying prospectivestudyofdnamethylationatchromosome8q24inperipheralbloodandprostatecancerrisk AT meyerann prospectivestudyofdnamethylationatchromosome8q24inperipheralbloodandprostatecancerrisk AT reddymahitha prospectivestudyofdnamethylationatchromosome8q24inperipheralbloodandprostatecancerrisk AT olerandrewj prospectivestudyofdnamethylationatchromosome8q24inperipheralbloodandprostatecancerrisk AT cookmichaelb prospectivestudyofdnamethylationatchromosome8q24inperipheralbloodandprostatecancerrisk AT fraumenijrjosephf prospectivestudyofdnamethylationatchromosome8q24inperipheralbloodandprostatecancerrisk AT yeagermeredith prospectivestudyofdnamethylationatchromosome8q24inperipheralbloodandprostatecancerrisk AT amundadottirlaufeyt prospectivestudyofdnamethylationatchromosome8q24inperipheralbloodandprostatecancerrisk AT berndtsonjai prospectivestudyofdnamethylationatchromosome8q24inperipheralbloodandprostatecancerrisk |