Cargando…
Extensive translation of circular RNAs driven by N(6)-methyladenosine
Extensive pre-mRNA back-splicing generates numerous circular RNAs (circRNAs) in human transcriptome. However, the biological functions of these circRNAs remain largely unclear. Here we report that N(6)-methyladenosine (m(6)A), the most abundant base modification of RNA, promotes efficient initiation...
Autores principales: | , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2017
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5520850/ https://www.ncbi.nlm.nih.gov/pubmed/28281539 http://dx.doi.org/10.1038/cr.2017.31 |
_version_ | 1783251879995637760 |
---|---|
author | Yang, Yun Fan, Xiaojuan Mao, Miaowei Song, Xiaowei Wu, Ping Zhang, Yang Jin, Yongfeng Yang, Yi Chen, Ling-Ling Wang, Yang Wong, Catherine CL Xiao, Xinshu Wang, Zefeng |
author_facet | Yang, Yun Fan, Xiaojuan Mao, Miaowei Song, Xiaowei Wu, Ping Zhang, Yang Jin, Yongfeng Yang, Yi Chen, Ling-Ling Wang, Yang Wong, Catherine CL Xiao, Xinshu Wang, Zefeng |
author_sort | Yang, Yun |
collection | PubMed |
description | Extensive pre-mRNA back-splicing generates numerous circular RNAs (circRNAs) in human transcriptome. However, the biological functions of these circRNAs remain largely unclear. Here we report that N(6)-methyladenosine (m(6)A), the most abundant base modification of RNA, promotes efficient initiation of protein translation from circRNAs in human cells. We discover that consensus m(6)A motifs are enriched in circRNAs and a single m(6)A site is sufficient to drive translation initiation. This m(6)A-driven translation requires initiation factor eIF4G2 and m(6)A reader YTHDF3, and is enhanced by methyltransferase METTL3/14, inhibited by demethylase FTO, and upregulated upon heat shock. Further analyses through polysome profiling, computational prediction and mass spectrometry reveal that m(6)A-driven translation of circRNAs is widespread, with hundreds of endogenous circRNAs having translation potential. Our study expands the coding landscape of human transcriptome, and suggests a role of circRNA-derived proteins in cellular responses to environmental stress. |
format | Online Article Text |
id | pubmed-5520850 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-55208502017-09-18 Extensive translation of circular RNAs driven by N(6)-methyladenosine Yang, Yun Fan, Xiaojuan Mao, Miaowei Song, Xiaowei Wu, Ping Zhang, Yang Jin, Yongfeng Yang, Yi Chen, Ling-Ling Wang, Yang Wong, Catherine CL Xiao, Xinshu Wang, Zefeng Cell Res Original Article Extensive pre-mRNA back-splicing generates numerous circular RNAs (circRNAs) in human transcriptome. However, the biological functions of these circRNAs remain largely unclear. Here we report that N(6)-methyladenosine (m(6)A), the most abundant base modification of RNA, promotes efficient initiation of protein translation from circRNAs in human cells. We discover that consensus m(6)A motifs are enriched in circRNAs and a single m(6)A site is sufficient to drive translation initiation. This m(6)A-driven translation requires initiation factor eIF4G2 and m(6)A reader YTHDF3, and is enhanced by methyltransferase METTL3/14, inhibited by demethylase FTO, and upregulated upon heat shock. Further analyses through polysome profiling, computational prediction and mass spectrometry reveal that m(6)A-driven translation of circRNAs is widespread, with hundreds of endogenous circRNAs having translation potential. Our study expands the coding landscape of human transcriptome, and suggests a role of circRNA-derived proteins in cellular responses to environmental stress. Nature Publishing Group 2017-05 2017-03-10 /pmc/articles/PMC5520850/ /pubmed/28281539 http://dx.doi.org/10.1038/cr.2017.31 Text en Copyright © 2017 The Author(s) http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 Unported License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Original Article Yang, Yun Fan, Xiaojuan Mao, Miaowei Song, Xiaowei Wu, Ping Zhang, Yang Jin, Yongfeng Yang, Yi Chen, Ling-Ling Wang, Yang Wong, Catherine CL Xiao, Xinshu Wang, Zefeng Extensive translation of circular RNAs driven by N(6)-methyladenosine |
title | Extensive translation of circular RNAs driven by N(6)-methyladenosine |
title_full | Extensive translation of circular RNAs driven by N(6)-methyladenosine |
title_fullStr | Extensive translation of circular RNAs driven by N(6)-methyladenosine |
title_full_unstemmed | Extensive translation of circular RNAs driven by N(6)-methyladenosine |
title_short | Extensive translation of circular RNAs driven by N(6)-methyladenosine |
title_sort | extensive translation of circular rnas driven by n(6)-methyladenosine |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5520850/ https://www.ncbi.nlm.nih.gov/pubmed/28281539 http://dx.doi.org/10.1038/cr.2017.31 |
work_keys_str_mv | AT yangyun extensivetranslationofcircularrnasdrivenbyn6methyladenosine AT fanxiaojuan extensivetranslationofcircularrnasdrivenbyn6methyladenosine AT maomiaowei extensivetranslationofcircularrnasdrivenbyn6methyladenosine AT songxiaowei extensivetranslationofcircularrnasdrivenbyn6methyladenosine AT wuping extensivetranslationofcircularrnasdrivenbyn6methyladenosine AT zhangyang extensivetranslationofcircularrnasdrivenbyn6methyladenosine AT jinyongfeng extensivetranslationofcircularrnasdrivenbyn6methyladenosine AT yangyi extensivetranslationofcircularrnasdrivenbyn6methyladenosine AT chenlingling extensivetranslationofcircularrnasdrivenbyn6methyladenosine AT wangyang extensivetranslationofcircularrnasdrivenbyn6methyladenosine AT wongcatherinecl extensivetranslationofcircularrnasdrivenbyn6methyladenosine AT xiaoxinshu extensivetranslationofcircularrnasdrivenbyn6methyladenosine AT wangzefeng extensivetranslationofcircularrnasdrivenbyn6methyladenosine |