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Improved Liver R2* Mapping by Averaging Decay Curves

Liver R2* mapping is often degraded by the low signal-to-noise ratio (SNR) especially in the presence of severe iron. This study aims to improve liver R2* mapping at low SNRs by averaging decay curves before the process of curve-fitting. Independently filtering echo images by nonlocal means (NLM) de...

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Autores principales: Zhang, Xinyuan, Peng, Jie, Wang, Changqing, Feng, Yanqiu, Feng, Qianjin, Li, Xinzhong, Chen, Wufan, He, Taigang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5522399/
https://www.ncbi.nlm.nih.gov/pubmed/28733666
http://dx.doi.org/10.1038/s41598-017-05683-5
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author Zhang, Xinyuan
Peng, Jie
Wang, Changqing
Feng, Yanqiu
Feng, Qianjin
Li, Xinzhong
Chen, Wufan
He, Taigang
author_facet Zhang, Xinyuan
Peng, Jie
Wang, Changqing
Feng, Yanqiu
Feng, Qianjin
Li, Xinzhong
Chen, Wufan
He, Taigang
author_sort Zhang, Xinyuan
collection PubMed
description Liver R2* mapping is often degraded by the low signal-to-noise ratio (SNR) especially in the presence of severe iron. This study aims to improve liver R2* mapping at low SNRs by averaging decay curves before the process of curve-fitting. Independently filtering echo images by nonlocal means (NLM) demonstrated improved quality of R2* mapping, but may introduce new errors due to the nonlinear nature of the NLM filter, during which the averaging weights may vary with different image contents at multiple echo times. In addition, the image denoising effect of the NLM may decline when no sufficient similar patches are available. To overcome these drawbacks, we proposed to filter decay curves instead of images. In this novel scheme, decay curves were averaged in a local window, each with a weight assigned according to the curve-similarity measured by the distance between one of the neighboring curves and the targeted one. The proposed method was tested on simulated, phantom and patient data. The results demonstrate that the proposed method can provide more accurate R2* mapping compared with the NLM algorithm, and hence has the potential to improve diagnosis and therapy in patients with liver iron.
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spelling pubmed-55223992017-07-26 Improved Liver R2* Mapping by Averaging Decay Curves Zhang, Xinyuan Peng, Jie Wang, Changqing Feng, Yanqiu Feng, Qianjin Li, Xinzhong Chen, Wufan He, Taigang Sci Rep Article Liver R2* mapping is often degraded by the low signal-to-noise ratio (SNR) especially in the presence of severe iron. This study aims to improve liver R2* mapping at low SNRs by averaging decay curves before the process of curve-fitting. Independently filtering echo images by nonlocal means (NLM) demonstrated improved quality of R2* mapping, but may introduce new errors due to the nonlinear nature of the NLM filter, during which the averaging weights may vary with different image contents at multiple echo times. In addition, the image denoising effect of the NLM may decline when no sufficient similar patches are available. To overcome these drawbacks, we proposed to filter decay curves instead of images. In this novel scheme, decay curves were averaged in a local window, each with a weight assigned according to the curve-similarity measured by the distance between one of the neighboring curves and the targeted one. The proposed method was tested on simulated, phantom and patient data. The results demonstrate that the proposed method can provide more accurate R2* mapping compared with the NLM algorithm, and hence has the potential to improve diagnosis and therapy in patients with liver iron. Nature Publishing Group UK 2017-07-21 /pmc/articles/PMC5522399/ /pubmed/28733666 http://dx.doi.org/10.1038/s41598-017-05683-5 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Zhang, Xinyuan
Peng, Jie
Wang, Changqing
Feng, Yanqiu
Feng, Qianjin
Li, Xinzhong
Chen, Wufan
He, Taigang
Improved Liver R2* Mapping by Averaging Decay Curves
title Improved Liver R2* Mapping by Averaging Decay Curves
title_full Improved Liver R2* Mapping by Averaging Decay Curves
title_fullStr Improved Liver R2* Mapping by Averaging Decay Curves
title_full_unstemmed Improved Liver R2* Mapping by Averaging Decay Curves
title_short Improved Liver R2* Mapping by Averaging Decay Curves
title_sort improved liver r2* mapping by averaging decay curves
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5522399/
https://www.ncbi.nlm.nih.gov/pubmed/28733666
http://dx.doi.org/10.1038/s41598-017-05683-5
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