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Improved Liver R2* Mapping by Averaging Decay Curves
Liver R2* mapping is often degraded by the low signal-to-noise ratio (SNR) especially in the presence of severe iron. This study aims to improve liver R2* mapping at low SNRs by averaging decay curves before the process of curve-fitting. Independently filtering echo images by nonlocal means (NLM) de...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5522399/ https://www.ncbi.nlm.nih.gov/pubmed/28733666 http://dx.doi.org/10.1038/s41598-017-05683-5 |
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author | Zhang, Xinyuan Peng, Jie Wang, Changqing Feng, Yanqiu Feng, Qianjin Li, Xinzhong Chen, Wufan He, Taigang |
author_facet | Zhang, Xinyuan Peng, Jie Wang, Changqing Feng, Yanqiu Feng, Qianjin Li, Xinzhong Chen, Wufan He, Taigang |
author_sort | Zhang, Xinyuan |
collection | PubMed |
description | Liver R2* mapping is often degraded by the low signal-to-noise ratio (SNR) especially in the presence of severe iron. This study aims to improve liver R2* mapping at low SNRs by averaging decay curves before the process of curve-fitting. Independently filtering echo images by nonlocal means (NLM) demonstrated improved quality of R2* mapping, but may introduce new errors due to the nonlinear nature of the NLM filter, during which the averaging weights may vary with different image contents at multiple echo times. In addition, the image denoising effect of the NLM may decline when no sufficient similar patches are available. To overcome these drawbacks, we proposed to filter decay curves instead of images. In this novel scheme, decay curves were averaged in a local window, each with a weight assigned according to the curve-similarity measured by the distance between one of the neighboring curves and the targeted one. The proposed method was tested on simulated, phantom and patient data. The results demonstrate that the proposed method can provide more accurate R2* mapping compared with the NLM algorithm, and hence has the potential to improve diagnosis and therapy in patients with liver iron. |
format | Online Article Text |
id | pubmed-5522399 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-55223992017-07-26 Improved Liver R2* Mapping by Averaging Decay Curves Zhang, Xinyuan Peng, Jie Wang, Changqing Feng, Yanqiu Feng, Qianjin Li, Xinzhong Chen, Wufan He, Taigang Sci Rep Article Liver R2* mapping is often degraded by the low signal-to-noise ratio (SNR) especially in the presence of severe iron. This study aims to improve liver R2* mapping at low SNRs by averaging decay curves before the process of curve-fitting. Independently filtering echo images by nonlocal means (NLM) demonstrated improved quality of R2* mapping, but may introduce new errors due to the nonlinear nature of the NLM filter, during which the averaging weights may vary with different image contents at multiple echo times. In addition, the image denoising effect of the NLM may decline when no sufficient similar patches are available. To overcome these drawbacks, we proposed to filter decay curves instead of images. In this novel scheme, decay curves were averaged in a local window, each with a weight assigned according to the curve-similarity measured by the distance between one of the neighboring curves and the targeted one. The proposed method was tested on simulated, phantom and patient data. The results demonstrate that the proposed method can provide more accurate R2* mapping compared with the NLM algorithm, and hence has the potential to improve diagnosis and therapy in patients with liver iron. Nature Publishing Group UK 2017-07-21 /pmc/articles/PMC5522399/ /pubmed/28733666 http://dx.doi.org/10.1038/s41598-017-05683-5 Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Zhang, Xinyuan Peng, Jie Wang, Changqing Feng, Yanqiu Feng, Qianjin Li, Xinzhong Chen, Wufan He, Taigang Improved Liver R2* Mapping by Averaging Decay Curves |
title | Improved Liver R2* Mapping by Averaging Decay Curves |
title_full | Improved Liver R2* Mapping by Averaging Decay Curves |
title_fullStr | Improved Liver R2* Mapping by Averaging Decay Curves |
title_full_unstemmed | Improved Liver R2* Mapping by Averaging Decay Curves |
title_short | Improved Liver R2* Mapping by Averaging Decay Curves |
title_sort | improved liver r2* mapping by averaging decay curves |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5522399/ https://www.ncbi.nlm.nih.gov/pubmed/28733666 http://dx.doi.org/10.1038/s41598-017-05683-5 |
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