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Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach

An increasing number of studies are showing that Antarctic mega- and macrofauna are highly diverse, however, little is known about meiofaunal biodiversity in sediment communities, which are a vital part of a healthy and functional ecosystem. This is the first study to analyse community DNA (targetin...

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Autores principales: Fonseca, V. G., Sinniger, F., Gaspar, J. M., Quince, C., Creer, S., Power, Deborah M., Peck, Lloyd S., Clark, Melody S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5522477/
https://www.ncbi.nlm.nih.gov/pubmed/28733608
http://dx.doi.org/10.1038/s41598-017-06687-x
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author Fonseca, V. G.
Sinniger, F.
Gaspar, J. M.
Quince, C.
Creer, S.
Power, Deborah M.
Peck, Lloyd S.
Clark, Melody S.
author_facet Fonseca, V. G.
Sinniger, F.
Gaspar, J. M.
Quince, C.
Creer, S.
Power, Deborah M.
Peck, Lloyd S.
Clark, Melody S.
author_sort Fonseca, V. G.
collection PubMed
description An increasing number of studies are showing that Antarctic mega- and macrofauna are highly diverse, however, little is known about meiofaunal biodiversity in sediment communities, which are a vital part of a healthy and functional ecosystem. This is the first study to analyse community DNA (targeting meiofauna) using metabarcoding to investigate biodiversity levels in sediment communities of the Antarctic Peninsula. The results show that almost all of the meiofaunal biodiversity in the benthic habitat has yet to be characterised, levels of biodiversity were higher than expected and similar to temperate regions, albeit with the existence of potentially new and locally adapted species never described before at the molecular level. The Rothera meiofaunal sample sites showed four dominant eukaryotic groups, the nematodes, arthropods, platyhelminthes, and the annelids; some of which could comprise species complexes. Comparisons with deep-sea data from the same region suggest little exchange of Operational Taxonomic Units (OTUs) between depths with the nematodes prevalent at all depths, but sharing the shallow water benthos with the copepods. This study provides a preliminary analysis of benthic Antarctic Peninsula meiofauna using high throughput sequencing which substantiates how little is known on the biodiversity of one of the most diverse, yet underexplored communities of the Antarctic: the benthos.
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spelling pubmed-55224772017-07-26 Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach Fonseca, V. G. Sinniger, F. Gaspar, J. M. Quince, C. Creer, S. Power, Deborah M. Peck, Lloyd S. Clark, Melody S. Sci Rep Article An increasing number of studies are showing that Antarctic mega- and macrofauna are highly diverse, however, little is known about meiofaunal biodiversity in sediment communities, which are a vital part of a healthy and functional ecosystem. This is the first study to analyse community DNA (targeting meiofauna) using metabarcoding to investigate biodiversity levels in sediment communities of the Antarctic Peninsula. The results show that almost all of the meiofaunal biodiversity in the benthic habitat has yet to be characterised, levels of biodiversity were higher than expected and similar to temperate regions, albeit with the existence of potentially new and locally adapted species never described before at the molecular level. The Rothera meiofaunal sample sites showed four dominant eukaryotic groups, the nematodes, arthropods, platyhelminthes, and the annelids; some of which could comprise species complexes. Comparisons with deep-sea data from the same region suggest little exchange of Operational Taxonomic Units (OTUs) between depths with the nematodes prevalent at all depths, but sharing the shallow water benthos with the copepods. This study provides a preliminary analysis of benthic Antarctic Peninsula meiofauna using high throughput sequencing which substantiates how little is known on the biodiversity of one of the most diverse, yet underexplored communities of the Antarctic: the benthos. Nature Publishing Group UK 2017-07-21 /pmc/articles/PMC5522477/ /pubmed/28733608 http://dx.doi.org/10.1038/s41598-017-06687-x Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Fonseca, V. G.
Sinniger, F.
Gaspar, J. M.
Quince, C.
Creer, S.
Power, Deborah M.
Peck, Lloyd S.
Clark, Melody S.
Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach
title Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach
title_full Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach
title_fullStr Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach
title_full_unstemmed Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach
title_short Revealing higher than expected meiofaunal diversity in Antarctic sediments: a metabarcoding approach
title_sort revealing higher than expected meiofaunal diversity in antarctic sediments: a metabarcoding approach
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5522477/
https://www.ncbi.nlm.nih.gov/pubmed/28733608
http://dx.doi.org/10.1038/s41598-017-06687-x
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