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Differentially methylated regions in patients with rheumatic heart disease and secondary pulmonary arterial hypertension
The aim of the present study was to identify differentially methylated regions (DMRs) in patients with rheumatic heart disease and secondary pulmonary arterial hypertension (RHD-PAH). A genome-wide DNA methylation assay was performed between 6 patients with RHD-PAH and 6 healthy controls using an Il...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
D.A. Spandidos
2017
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5525905/ https://www.ncbi.nlm.nih.gov/pubmed/28810598 http://dx.doi.org/10.3892/etm.2017.4652 |
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author | Zheng, Dawei Chen, Xiaoying Li, Ni Sun, Lebo Zhou, Qingyun Shi, Huoshun Xu, Guodong Liu, Jing Xu, Limin Duan, Shiwei Shao, Guofeng |
author_facet | Zheng, Dawei Chen, Xiaoying Li, Ni Sun, Lebo Zhou, Qingyun Shi, Huoshun Xu, Guodong Liu, Jing Xu, Limin Duan, Shiwei Shao, Guofeng |
author_sort | Zheng, Dawei |
collection | PubMed |
description | The aim of the present study was to identify differentially methylated regions (DMRs) in patients with rheumatic heart disease and secondary pulmonary arterial hypertension (RHD-PAH). A genome-wide DNA methylation assay was performed between 6 patients with RHD-PAH and 6 healthy controls using an Illumina Infinium HumanMethylation450 BeadChip kit. The Limma software package was subsequently used to identify significant DMRs. A total of 40 hypome-thylated and 64 hypermethylated CpG sites were identified between the RHD-PAH group and the control group. Gene Ontology and Kyoto Encyclopedia of Genes and Genomes term and signaling pathway enrichment analyses revealed that the DMRs, mapped to the genes including protein kinase C α, protein kinase AMP-activated non-catalytic subunit γ2, sprouty related EVH1 domain containing 2 and LIF interleukin 6 family cytokine, were significantly enriched in the negative regulation of protein kinase/transferase activity and the positive regulation of protein amino acid phosphorylation/phosphate metabolic process. The identified DMRs may provide novel insights into the pathogenesis of RHD-PAH. |
format | Online Article Text |
id | pubmed-5525905 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | D.A. Spandidos |
record_format | MEDLINE/PubMed |
spelling | pubmed-55259052017-08-11 Differentially methylated regions in patients with rheumatic heart disease and secondary pulmonary arterial hypertension Zheng, Dawei Chen, Xiaoying Li, Ni Sun, Lebo Zhou, Qingyun Shi, Huoshun Xu, Guodong Liu, Jing Xu, Limin Duan, Shiwei Shao, Guofeng Exp Ther Med Articles The aim of the present study was to identify differentially methylated regions (DMRs) in patients with rheumatic heart disease and secondary pulmonary arterial hypertension (RHD-PAH). A genome-wide DNA methylation assay was performed between 6 patients with RHD-PAH and 6 healthy controls using an Illumina Infinium HumanMethylation450 BeadChip kit. The Limma software package was subsequently used to identify significant DMRs. A total of 40 hypome-thylated and 64 hypermethylated CpG sites were identified between the RHD-PAH group and the control group. Gene Ontology and Kyoto Encyclopedia of Genes and Genomes term and signaling pathway enrichment analyses revealed that the DMRs, mapped to the genes including protein kinase C α, protein kinase AMP-activated non-catalytic subunit γ2, sprouty related EVH1 domain containing 2 and LIF interleukin 6 family cytokine, were significantly enriched in the negative regulation of protein kinase/transferase activity and the positive regulation of protein amino acid phosphorylation/phosphate metabolic process. The identified DMRs may provide novel insights into the pathogenesis of RHD-PAH. D.A. Spandidos 2017-08 2017-06-22 /pmc/articles/PMC5525905/ /pubmed/28810598 http://dx.doi.org/10.3892/etm.2017.4652 Text en Copyright: © Zheng et al. This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made. |
spellingShingle | Articles Zheng, Dawei Chen, Xiaoying Li, Ni Sun, Lebo Zhou, Qingyun Shi, Huoshun Xu, Guodong Liu, Jing Xu, Limin Duan, Shiwei Shao, Guofeng Differentially methylated regions in patients with rheumatic heart disease and secondary pulmonary arterial hypertension |
title | Differentially methylated regions in patients with rheumatic heart disease and secondary pulmonary arterial hypertension |
title_full | Differentially methylated regions in patients with rheumatic heart disease and secondary pulmonary arterial hypertension |
title_fullStr | Differentially methylated regions in patients with rheumatic heart disease and secondary pulmonary arterial hypertension |
title_full_unstemmed | Differentially methylated regions in patients with rheumatic heart disease and secondary pulmonary arterial hypertension |
title_short | Differentially methylated regions in patients with rheumatic heart disease and secondary pulmonary arterial hypertension |
title_sort | differentially methylated regions in patients with rheumatic heart disease and secondary pulmonary arterial hypertension |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5525905/ https://www.ncbi.nlm.nih.gov/pubmed/28810598 http://dx.doi.org/10.3892/etm.2017.4652 |
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