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Association of human height-related genetic variants with familial short stature in Han Chinese in Taiwan

Human height can be described as a classical and inherited trait model. Genome-wide association studies (GWAS) have revealed susceptible loci and provided insights into the polygenic nature of human height. Familial short stature (FSS) represents a suitable trait for investigating short stature gene...

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Autores principales: Lin, Ying-Ju, Liao, Wen-Ling, Wang, Chung-Hsing, Tsai, Li-Ping, Tang, Chih-Hsin, Chen, Chien-Hsiun, Wu, Jer-Yuarn, Liang, Wen-Miin, Hsieh, Ai-Ru, Cheng, Chi-Fung, Chen, Jin-Hua, Chien, Wen-Kuei, Lin, Ting-Hsu, Wu, Chia-Ming, Liao, Chiu-Chu, Huang, Shao-Mei, Tsai, Fuu-Jen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5527114/
https://www.ncbi.nlm.nih.gov/pubmed/28744006
http://dx.doi.org/10.1038/s41598-017-06766-z
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author Lin, Ying-Ju
Liao, Wen-Ling
Wang, Chung-Hsing
Tsai, Li-Ping
Tang, Chih-Hsin
Chen, Chien-Hsiun
Wu, Jer-Yuarn
Liang, Wen-Miin
Hsieh, Ai-Ru
Cheng, Chi-Fung
Chen, Jin-Hua
Chien, Wen-Kuei
Lin, Ting-Hsu
Wu, Chia-Ming
Liao, Chiu-Chu
Huang, Shao-Mei
Tsai, Fuu-Jen
author_facet Lin, Ying-Ju
Liao, Wen-Ling
Wang, Chung-Hsing
Tsai, Li-Ping
Tang, Chih-Hsin
Chen, Chien-Hsiun
Wu, Jer-Yuarn
Liang, Wen-Miin
Hsieh, Ai-Ru
Cheng, Chi-Fung
Chen, Jin-Hua
Chien, Wen-Kuei
Lin, Ting-Hsu
Wu, Chia-Ming
Liao, Chiu-Chu
Huang, Shao-Mei
Tsai, Fuu-Jen
author_sort Lin, Ying-Ju
collection PubMed
description Human height can be described as a classical and inherited trait model. Genome-wide association studies (GWAS) have revealed susceptible loci and provided insights into the polygenic nature of human height. Familial short stature (FSS) represents a suitable trait for investigating short stature genetics because disease associations with short stature have been ruled out in this case. In addition, FSS is caused only by genetically inherited factors. In this study, we explored the correlations of FSS risk with the genetic loci associated with human height in previous GWAS, alone and cumulatively. We systematically evaluated 34 known human height single nucleotide polymorphisms (SNPs) in relation to FSS in the additive model (p < 0.00005). A cumulative effect was observed: the odds ratios gradually increased with increasing genetic risk score quartiles (p < 0.001; Cochran-Armitage trend test). Six affected genes—ZBTB38, ZNF638, LCORL, CABLES1, CDK10, and TSEN15—are located in the nucleus and have been implicated in embryonic, organismal, and tissue development. In conclusion, our study suggests that 13 human height GWAS-identified SNPs are associated with FSS risk both alone and cumulatively.
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spelling pubmed-55271142017-08-02 Association of human height-related genetic variants with familial short stature in Han Chinese in Taiwan Lin, Ying-Ju Liao, Wen-Ling Wang, Chung-Hsing Tsai, Li-Ping Tang, Chih-Hsin Chen, Chien-Hsiun Wu, Jer-Yuarn Liang, Wen-Miin Hsieh, Ai-Ru Cheng, Chi-Fung Chen, Jin-Hua Chien, Wen-Kuei Lin, Ting-Hsu Wu, Chia-Ming Liao, Chiu-Chu Huang, Shao-Mei Tsai, Fuu-Jen Sci Rep Article Human height can be described as a classical and inherited trait model. Genome-wide association studies (GWAS) have revealed susceptible loci and provided insights into the polygenic nature of human height. Familial short stature (FSS) represents a suitable trait for investigating short stature genetics because disease associations with short stature have been ruled out in this case. In addition, FSS is caused only by genetically inherited factors. In this study, we explored the correlations of FSS risk with the genetic loci associated with human height in previous GWAS, alone and cumulatively. We systematically evaluated 34 known human height single nucleotide polymorphisms (SNPs) in relation to FSS in the additive model (p < 0.00005). A cumulative effect was observed: the odds ratios gradually increased with increasing genetic risk score quartiles (p < 0.001; Cochran-Armitage trend test). Six affected genes—ZBTB38, ZNF638, LCORL, CABLES1, CDK10, and TSEN15—are located in the nucleus and have been implicated in embryonic, organismal, and tissue development. In conclusion, our study suggests that 13 human height GWAS-identified SNPs are associated with FSS risk both alone and cumulatively. Nature Publishing Group UK 2017-07-25 /pmc/articles/PMC5527114/ /pubmed/28744006 http://dx.doi.org/10.1038/s41598-017-06766-z Text en © The Author(s) 2017 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Lin, Ying-Ju
Liao, Wen-Ling
Wang, Chung-Hsing
Tsai, Li-Ping
Tang, Chih-Hsin
Chen, Chien-Hsiun
Wu, Jer-Yuarn
Liang, Wen-Miin
Hsieh, Ai-Ru
Cheng, Chi-Fung
Chen, Jin-Hua
Chien, Wen-Kuei
Lin, Ting-Hsu
Wu, Chia-Ming
Liao, Chiu-Chu
Huang, Shao-Mei
Tsai, Fuu-Jen
Association of human height-related genetic variants with familial short stature in Han Chinese in Taiwan
title Association of human height-related genetic variants with familial short stature in Han Chinese in Taiwan
title_full Association of human height-related genetic variants with familial short stature in Han Chinese in Taiwan
title_fullStr Association of human height-related genetic variants with familial short stature in Han Chinese in Taiwan
title_full_unstemmed Association of human height-related genetic variants with familial short stature in Han Chinese in Taiwan
title_short Association of human height-related genetic variants with familial short stature in Han Chinese in Taiwan
title_sort association of human height-related genetic variants with familial short stature in han chinese in taiwan
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5527114/
https://www.ncbi.nlm.nih.gov/pubmed/28744006
http://dx.doi.org/10.1038/s41598-017-06766-z
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