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Mechanisms and Regulation of Extracellular DNA Release and Its Biological Roles in Microbial Communities
The capacity to release genetic material into the extracellular medium has been reported in cultures of numerous species of bacteria, archaea, and fungi, and also in the context of multicellular microbial communities such as biofilms. Moreover, extracellular DNA (eDNA) of microbial origin is widespr...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2017
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5527159/ https://www.ncbi.nlm.nih.gov/pubmed/28798731 http://dx.doi.org/10.3389/fmicb.2017.01390 |
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author | Ibáñez de Aldecoa, Alejandra L. Zafra, Olga González-Pastor, José E. |
author_facet | Ibáñez de Aldecoa, Alejandra L. Zafra, Olga González-Pastor, José E. |
author_sort | Ibáñez de Aldecoa, Alejandra L. |
collection | PubMed |
description | The capacity to release genetic material into the extracellular medium has been reported in cultures of numerous species of bacteria, archaea, and fungi, and also in the context of multicellular microbial communities such as biofilms. Moreover, extracellular DNA (eDNA) of microbial origin is widespread in natural aquatic and terrestrial environments. Different specific mechanisms are involved in eDNA release, such as autolysis and active secretion, as well as through its association with membrane vesicles. It is noteworthy that in microorganisms, in which DNA release has been studied in detail, the production of eDNA is coordinated by the population when it reaches a certain cell density, and is induced in a subpopulation in response to the accumulation of quorum sensing signals. Interestingly, in several bacteria there is also a relationship between eDNA release and the development of natural competence (the ability to take up DNA from the environment), which is also controlled by quorum sensing. Then, what is the biological function of eDNA? A common biological role has not been proposed, since different functions have been reported depending on the microorganism. However, it seems to be important in biofilm formation, can be used as a nutrient source, and could be involved in DNA damage repair and gene transfer. This review covers several aspects of eDNA research: (i) its occurrence and distribution in natural environments, (ii) the mechanisms and regulation of its release in cultured microorganisms, and (iii) its biological roles. In addition, we propose that eDNA release could be considered a social behavior, based on its quorum sensing-dependent regulation and on the described functions of eDNA in the context of microbial communities. |
format | Online Article Text |
id | pubmed-5527159 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2017 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-55271592017-08-10 Mechanisms and Regulation of Extracellular DNA Release and Its Biological Roles in Microbial Communities Ibáñez de Aldecoa, Alejandra L. Zafra, Olga González-Pastor, José E. Front Microbiol Microbiology The capacity to release genetic material into the extracellular medium has been reported in cultures of numerous species of bacteria, archaea, and fungi, and also in the context of multicellular microbial communities such as biofilms. Moreover, extracellular DNA (eDNA) of microbial origin is widespread in natural aquatic and terrestrial environments. Different specific mechanisms are involved in eDNA release, such as autolysis and active secretion, as well as through its association with membrane vesicles. It is noteworthy that in microorganisms, in which DNA release has been studied in detail, the production of eDNA is coordinated by the population when it reaches a certain cell density, and is induced in a subpopulation in response to the accumulation of quorum sensing signals. Interestingly, in several bacteria there is also a relationship between eDNA release and the development of natural competence (the ability to take up DNA from the environment), which is also controlled by quorum sensing. Then, what is the biological function of eDNA? A common biological role has not been proposed, since different functions have been reported depending on the microorganism. However, it seems to be important in biofilm formation, can be used as a nutrient source, and could be involved in DNA damage repair and gene transfer. This review covers several aspects of eDNA research: (i) its occurrence and distribution in natural environments, (ii) the mechanisms and regulation of its release in cultured microorganisms, and (iii) its biological roles. In addition, we propose that eDNA release could be considered a social behavior, based on its quorum sensing-dependent regulation and on the described functions of eDNA in the context of microbial communities. Frontiers Media S.A. 2017-07-26 /pmc/articles/PMC5527159/ /pubmed/28798731 http://dx.doi.org/10.3389/fmicb.2017.01390 Text en Copyright © 2017 Ibáñez de Aldecoa, Zafra and González-Pastor. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Microbiology Ibáñez de Aldecoa, Alejandra L. Zafra, Olga González-Pastor, José E. Mechanisms and Regulation of Extracellular DNA Release and Its Biological Roles in Microbial Communities |
title | Mechanisms and Regulation of Extracellular DNA Release and Its Biological Roles in Microbial Communities |
title_full | Mechanisms and Regulation of Extracellular DNA Release and Its Biological Roles in Microbial Communities |
title_fullStr | Mechanisms and Regulation of Extracellular DNA Release and Its Biological Roles in Microbial Communities |
title_full_unstemmed | Mechanisms and Regulation of Extracellular DNA Release and Its Biological Roles in Microbial Communities |
title_short | Mechanisms and Regulation of Extracellular DNA Release and Its Biological Roles in Microbial Communities |
title_sort | mechanisms and regulation of extracellular dna release and its biological roles in microbial communities |
topic | Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5527159/ https://www.ncbi.nlm.nih.gov/pubmed/28798731 http://dx.doi.org/10.3389/fmicb.2017.01390 |
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